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Human disease related genes
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Keyword
Chromosome
1
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8
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Stomach 1
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Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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13607 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
E2F4
ENSSSCG00000002787
ENSG00000205250
E2F transcription factor 4
Low tissue specificity
Detected in all
E2F5
ENSSSCG00000006145
ENSG00000133740
E2F transcription factor 5
Tissue enhanced
Detected in many
male glands:
28.1
E2F6
ENSSSCG00000026161
ENSG00000169016
E2F transcription factor 6
Low tissue specificity
Detected in all
E4F1
ENSSSCG00000008047
ENSG00000167967
E4F transcription factor 1
Low tissue specificity
Detected in all
EAF1
ENSSSCG00000026622
ENSG00000144597
ELL-associated factor 1
Low tissue specificity
Detected in all
EAPP
ENSSSCG00000001960
ENSG00000129518
E2F associated phosphoprotein
Low tissue specificity
Detected in all
EARS2
ENSSSCG00000010797
ENSG00000103356
Glutamyl-tRNA synthetase 2, mitochondrial
Low tissue specificity
Detected in all
EBF4
ENSSSCG00000007171
ENSG00000088881
Early B cell factor 4
Low tissue specificity
Detected in many
EBI3
ENSSSCG00000013498
ENSG00000105246
Interleukin-27 subunit beta precursor
Tissue enhanced
Detected in many
lymphoid tissue:
16.4
EBNA1BP2
ENSSSCG00000030177
ENSG00000117395
EBNA1 binding protein 2
Low tissue specificity
Detected in all
EBP
ENSSSCG00000032768
ENSG00000147155
3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
Tissue enhanced
Detected in all
liver:
53.4
ovary:
47.3
EBPL
ENSSSCG00000009393
ENSG00000123179
Emopamil binding protein like
Tissue enhanced
Detected in all
lens:
27.8
ECD
ENSSSCG00000010295
ENSG00000122882
Ecdysoneless cell cycle regulator
Low tissue specificity
Detected in all
ECE1
ENSSSCG00000003513
ENSG00000117298
Endothelin converting enzyme 1
Low tissue specificity
Detected in all
ECH1
ENSSSCG00000028943
ENSG00000104823
Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
Low tissue specificity
Detected in all
ECHDC1
ENSSSCG00000004216
ENSG00000093144
Ethylmalonyl-CoA decarboxylase 1
Tissue enhanced
Detected in all
liver:
44.8
skin:
40.8
ECHDC2
ENSSSCG00000003854
ENSG00000121310
Enoyl-CoA hydratase domain containing 2
Tissue enhanced
Detected in all
kidney:
81.4
liver:
79.8
ECHDC3
ENSSSCG00000011119
ENSG00000134463
Enoyl-CoA hydratase domain containing 3
Tissue enhanced
Detected in all
liver:
76.2
ECHS1
ENSSSCG00000038086
ENSG00000127884
Enoyl-CoA hydratase, mitochondrial
Tissue enhanced
Detected in all
liver:
73.1
ECI1
ENSSSCG00000034338
ENSG00000167969
Enoyl-CoA delta isomerase 1, mitochondrial
Tissue enhanced
Detected in all
liver:
96.2
ECI2
ENSSSCG00000001000
ENSG00000198721
Enoyl-CoA delta isomerase 2, mitochondrial
Tissue enhanced
Detected in all
liver:
61.0
ECPAS
ENSSSCG00000005459
ENSG00000136813
Ecm29 proteasome adaptor and scaffold
Low tissue specificity
Detected in all
ECSIT
ENSSSCG00000013615
ENSG00000130159
ECSIT signalling integrator
Tissue enhanced
Detected in all
heart:
50.5
skeletal muscle:
54.1
ECT2
ENSSSCG00000035746
ENSG00000114346
Epithelial cell transforming 2
Tissue enhanced
Detected in all
lymphoid tissue:
23.4
testis:
23.6
EDA
ENSSSCG00000021647
ENSG00000158813
Ectodysplasin A
Low tissue specificity
Detected in many
EDAR
ENSSSCG00000008134
ENSG00000135960
Ectodysplasin A receptor
Low tissue specificity
Detected in all
EDARADD
ENSSSCG00000025986
ENSG00000186197
Ectodysplasin-A receptor-associated adapter protein
Low tissue specificity
Detected in many
EDC3
ENSSSCG00000001903
ENSG00000179151
Enhancer of mRNA decapping 3
Low tissue specificity
Detected in all
EDC4
ENSSSCG00000002771
ENSG00000038358
Enhancer of mRNA decapping 4
Low tissue specificity
Detected in all
EDEM1
ENSSSCG00000034197
ENSG00000134109
ER degradation enhancing alpha-mannosidase like protein 1
Tissue enhanced
Detected in all
lymphoid tissue:
66.0
EDEM2
ENSSSCG00000007291
ENSG00000088298
ER degradation enhancing alpha-mannosidase like protein 2
Tissue enhanced
Detected in all
epididymis:
59.3
EDEM3
ENSSSCG00000015566
ENSG00000116406
ER degradation enhancing alpha-mannosidase like protein 3
Tissue enhanced
Detected in all
male glands:
85.7
salivary gland:
55.5
EDF1
ENSSSCG00000038203
ENSG00000107223
Endothelial differentiation related factor 1
Low tissue specificity
Detected in all
EDN1
ENSSSCG00000035598
ENSG00000078401
Endothelin-1 preproprotein
Low tissue specificity
Detected in all
EDRF1
ENSSSCG00000010741
ENSG00000107938
Erythroid differentiation regulatory factor 1
Low tissue specificity
Detected in all
EED
ENSSSCG00000014915
ENSG00000074266
Embryonic ectoderm development
Low tissue specificity
Detected in all
EEF1A1
ENSSSCG00000004489
ENSG00000156508
Elongation factor 1-alpha 1
Low tissue specificity
Detected in all
EEF1AKMT1
ENSSSCG00000031468
ENSG00000150456
EEF1A lysine methyltransferase 1
Low tissue specificity
Detected in all
EEF1AKMT3
ENSSSCG00000037619
ENSG00000123427
EEF1A lysine methyltransferase 3
Low tissue specificity
Detected in all
EEF1B2
ENSSSCG00000016128
ENSG00000114942
Elongation factor 1-beta
Low tissue specificity
Detected in all
EEF1D
ENSSSCG00000006954
ENSG00000104529
Eukaryotic translation elongation factor 1 delta
Low tissue specificity
Detected in all
EEF2
ENSSSCG00000025675
ENSG00000167658
Eukaryotic translation elongation factor 2
Low tissue specificity
Detected in all
EEF2K
ENSSSCG00000007839
ENSG00000103319
Eukaryotic elongation factor 2 kinase
Low tissue specificity
Detected in all
EEFSEC
ENSSSCG00000011619
ENSG00000132394
Eukaryotic elongation factor, selenocysteine-tRNA specific
Low tissue specificity
Detected in all
EEPD1
ENSSSCG00000039703
ENSG00000122547
Endonuclease/exonuclease/phosphatase family domain containing 1
Tissue enhanced
Detected in many
adipose tissue:
46.7
skeletal muscle:
33.4
EFCAB1
ENSSSCG00000032887
ENSG00000034239
EF-hand calcium binding domain 1
Low tissue specificity
Detected in all
EFCAB11
ENSSSCG00000002430
ENSG00000140025
EF-hand calcium binding domain 11
Tissue enhanced
Detected in all
testis:
43.6
EFCAB14
ENSSSCG00000003895
ENSG00000159658
EF-hand calcium binding domain 14
Low tissue specificity
Detected in all
EFCAB2
ENSSSCG00000010878
ENSG00000203666
EF-hand calcium binding domain 2
Tissue enhanced
Detected in all
testis:
30.8
EFCAB7
ENSSSCG00000003814
ENSG00000203965
EF-hand calcium binding domain 7
Low tissue specificity
Detected in all
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