We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
13607 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 273 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
COX4I2
ENSSSCG00000038384
ENSG00000131055
Cytochrome c oxidase subunit 4I2
Tissue enhanced
Detected in many
cartilage:
113.6
COX5A
ENSSSCG00000024316
ENSG00000178741
Cytochrome c oxidase subunit 5A
Tissue enhanced
Detected in all
heart:
90.1
skeletal muscle:
146.7
COX5B
ENSSSCG00000008195
ENSG00000135940
Cytochrome c oxidase subunit 5B, mitochondrial
Tissue enhanced
Detected in all
heart:
93.9
skeletal muscle:
105.6
COX6A1
ENSSSCG00000039265
ENSG00000111775
Cytochrome c oxidase subunit VIa polypeptide 1
Low tissue specificity
Detected in all
COX6A2
ENSSSCG00000036789
ENSG00000156885
Cytochrome c oxidase subunit 6A2
Tissue enhanced
Detected in all
heart:
67.7
skeletal muscle:
101.5
COX6B2
ENSSSCG00000035612
ENSG00000160471
Cytochrome c oxidase subunit 6B2
Tissue enriched
Detected in some
testis:
128.8
COX6C
ENSSSCG00000006070
ENSG00000164919
Cytochrome c oxidase subunit 6C
Low tissue specificity
Detected in all
COX7A1
ENSSSCG00000037792
ENSG00000161281
Cytochrome c oxidase subunit 7A1, mitochondrial
Tissue enhanced
Detected in all
heart:
61.1
skeletal muscle:
66.1
COX7A2
ENSSSCG00000004480
Cytochrome c oxidase subunit 7A2, mitochondrial
Tissue enhanced
Detected in all
testis:
75.3
COX7A2L
ENSSSCG00000008466
ENSG00000115944
Cytochrome c oxidase subunit 7A2 like
Low tissue specificity
Detected in all
CP
ENSSSCG00000011700
ENSG00000047457
Ceruloplasmin precursor
Tissue enriched
Detected in many
liver:
192.8
CPA1
ENSSSCG00000016557
ENSG00000091704
Carboxypeptidase A1
Tissue enhanced
Detected in many
testis:
18.3
CPA5
ENSSSCG00000016555
ENSG00000158525
Carboxypeptidase A5
Tissue enriched
Detected in some
testis:
53.8
CPA6
ENSSSCG00000006200
ENSG00000165078
Carboxypeptidase A6
Low tissue specificity
Detected in all
CPD
ENSSSCG00000017799
ENSG00000108582
Carboxypeptidase D
Tissue enhanced
Detected in all
male glands:
86.0
CPEB1
ENSSSCG00000001808
Cytoplasmic polyadenylation element-binding protein 1
Tissue enriched
Detected in many
lens:
70.9
CPEB2
ENSSSCG00000038410
ENSG00000137449
Cytoplasmic polyadenylation element-binding protein 2
Tissue enhanced
Detected in all
testis:
57.4
CPEB3
ENSSSCG00000010468
ENSG00000107864
Cytoplasmic polyadenylation element binding protein 3
Tissue enhanced
Detected in all
salivary gland:
51.1
CPEB4
ENSSSCG00000016981
ENSG00000113742
Cytoplasmic polyadenylation element binding protein 4
Tissue enhanced
Detected in all
kidney:
103.8
lens:
104.0
CPM
ENSSSCG00000023630
ENSG00000135678
Carboxypeptidase M
Low tissue specificity
Detected in all
CPN1
ENSSSCG00000010545
ENSG00000120054
Carboxypeptidase N subunit 1
Tissue enhanced
Detected in all
cartilage:
64.6
liver:
42.0
CPNE1
ENSSSCG00000007306
ENSG00000214078
Copine-1
Low tissue specificity
Detected in all
CPNE3
ENSSSCG00000006135
ENSG00000085719
Copine 3
Low tissue specificity
Detected in all
CPO
ENSSSCG00000016135
ENSG00000144410
Carboxypeptidase O
Tissue enriched
Detected in many
small intestine:
23.6
CPOX
ENSSSCG00000011978
ENSG00000080819
Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial
Tissue enhanced
Detected in all
liver:
32.0
CPPED1
ENSSSCG00000024206
ENSG00000103381
Serine/threonine-protein phosphatase CPPED1
Low tissue specificity
Detected in all
CPQ
ENSSSCG00000006087
ENSG00000104324
Carboxypeptidase Q precursor
Tissue enhanced
Detected in all
thyroid gland:
65.0
CPSF1
ENSSSCG00000005906
ENSG00000071894
Cleavage and polyadenylation specific factor 1
Low tissue specificity
Detected in all
CPSF2
ENSSSCG00000002447
ENSG00000165934
Cleavage and polyadenylation specific factor 2
Low tissue specificity
Detected in all
CPSF3
ENSSSCG00000020799
ENSG00000119203
Cleavage and polyadenylation specific factor 3
Low tissue specificity
Detected in all
CPSF4
ENSSSCG00000026896
ENSG00000160917
Cleavage and polyadenylation specific factor 4
Low tissue specificity
Detected in all
CPSF4L
ENSSSCG00000040611
ENSG00000187959
Cleavage and polyadenylation specific factor 4 like
Tissue enhanced
Detected in many
male glands:
23.9
retina:
20.1
salivary gland:
18.8
CPSF6
ENSSSCG00000038031
ENSG00000111605
Cleavage and polyadenylation specificity factor subunit 6
Low tissue specificity
Detected in all
CPSF7
ENSSSCG00000013083
ENSG00000149532
Cleavage and polyadenylation specific factor 7
Low tissue specificity
Detected in all
CPT1A
ENSSSCG00000012880
ENSG00000110090
Carnitine O-palmitoyltransferase 1, liver isoform
Low tissue specificity
Detected in all
CPT2
ENSSSCG00000003851
ENSG00000157184
Carnitine O-palmitoyltransferase 2, mitochondrial precursor
Low tissue specificity
Detected in all
CPXM1
ENSSSCG00000007170
ENSG00000088882
Carboxypeptidase X, M14 family member 1
Tissue enhanced
Detected in many
cartilage:
29.8
CPXM2
ENSSSCG00000010728
ENSG00000121898
Carboxypeptidase X, M14 family member 2
Tissue enhanced
Detected in all
cornea:
87.2
CRADD
ENSSSCG00000000910
ENSG00000169372
Suppressor of cytokine signaling 2
Low tissue specificity
Detected in all
CRAMP1
ENSSSCG00000008026
ENSG00000007545
Cramped chromatin regulator homolog 1
Low tissue specificity
Detected in all
CRAT
ENSSSCG00000005671
ENSG00000095321
Carnitine O-acetyltransferase
Tissue enhanced
Detected in all
skeletal muscle:
122.7
CRB2
ENSSSCG00000005584
ENSG00000148204
Crumbs 2, cell polarity complex component
Tissue enhanced
Detected in some
adipose tissue:
22.8
cornea:
11.4
mesothelial tissue:
22.3
CRBN
ENSSSCG00000011530
ENSG00000113851
Cereblon
Tissue enhanced
Detected in all
lens:
55.5
CRCP
ENSSSCG00000032119
ENSG00000241258
CGRP receptor component
Low tissue specificity
Detected in all
CREB1
ENSSSCG00000034395
ENSG00000118260
CAMP responsive element binding protein 1
Low tissue specificity
Detected in all
CREB3
ENSSSCG00000005318
ENSG00000107175
Cyclic AMP-responsive element-binding protein 3
Tissue enriched
Detected in all
male glands:
104.0
CREB3L1
ENSSSCG00000013263
ENSG00000157613
CAMP responsive element binding protein 3 like 1
Tissue enhanced
Detected in all
esophagus:
81.9
male glands:
132.0
salivary gland:
90.7
stomach:
87.6
CREB3L2
ENSSSCG00000016520
ENSG00000182158
CAMP responsive element binding protein 3 like 2
Tissue enhanced
Detected in all
cartilage:
77.8
CREB3L4
ENSSSCG00000006560
ENSG00000143578
Cyclic AMP-responsive element-binding protein 3-like protein 4
Tissue enhanced
Detected in all
male glands:
52.6
CREB5
ENSSSCG00000016690
ENSG00000146592
CAMP responsive element binding protein 5
Tissue enhanced
Detected in many
cartilage:
153.5
synovial tissue:
46.5
« prev
| Page
of 273 |
next »
MENU
