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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
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5
6
7
8
9
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12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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13607 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
NAXE
ENSSSCG00000006480
ENSG00000163382
NAD(P)H-hydrate epimerase precursor
Low tissue specificity
Detected in all
NBAS
ENSSSCG00000008621
ENSG00000151779
Neuroblastoma amplified sequence
Low tissue specificity
Detected in all
NBDY
ENSSSCG00000037192
ENSG00000204272
Negative regulator of P-body association
Low tissue specificity
Detected in all
NBEA
ENSSSCG00000034348
ENSG00000172915
Neurobeachin
Low tissue specificity
Detected in all
NBL1
ENSSSCG00000024669
ENSG00000158747
Neuroblastoma 1, DAN family BMP antagonist
Tissue enhanced
Detected in all
cervix:
154.2
male glands:
140.5
NBN
ENSSSCG00000006127
ENSG00000104320
Nibrin
Low tissue specificity
Detected in all
NBR1
ENSSSCG00000030211
ENSG00000188554
NBR1, autophagy cargo receptor
Low tissue specificity
Detected in all
NCALD
ENSSSCG00000006059
ENSG00000104490
Neurocalcin-delta
Tissue enhanced
Detected in many
brain:
50.1
lens:
34.5
NCAM1
ENSSSCG00000015045
ENSG00000149294
Neural cell adhesion molecule 1
Tissue enhanced
Detected in many
brain:
63.8
lens:
39.5
NCAPD2
ENSSSCG00000000693
ENSG00000010292
Non-SMC condensin I complex subunit D2
Low tissue specificity
Detected in all
NCAPD3
ENSSSCG00000022192
ENSG00000151503
Non-SMC condensin II complex subunit D3
Low tissue specificity
Detected in all
NCAPG
ENSSSCG00000008747
ENSG00000109805
Non-SMC condensin I complex subunit G
Low tissue specificity
Detected in all
NCAPG2
ENSSSCG00000028169
ENSG00000146918
Non-SMC condensin II complex subunit G2
Tissue enhanced
Detected in all
lymphoid tissue:
27.4
testis:
16.8
NCAPH
ENSSSCG00000008125
ENSG00000121152
Non-SMC condensin I complex subunit H
Low tissue specificity
Detected in all
NCAPH2
ENSSSCG00000000965
ENSG00000025770
Condensin-2 complex subunit H2
Low tissue specificity
Detected in all
NCBP1
ENSSSCG00000005366
ENSG00000136937
Nuclear cap binding protein subunit 1
Low tissue specificity
Detected in all
NCBP2
ENSSSCG00000027323
ENSG00000114503
Nuclear cap binding protein subunit 2
Low tissue specificity
Detected in all
NCBP2-AS2
ENSSSCG00000038542
ENSG00000270170
NCBP2 antisense RNA 2 (head to head)
Low tissue specificity
Detected in many
NCBP3
ENSSSCG00000017870
ENSG00000074356
Nuclear cap binding subunit 3
Low tissue specificity
Detected in all
NCDN
ENSSSCG00000031786
ENSG00000020129
Neurochondrin
Group enriched
Detected in all
brain:
88.3
pineal gland:
30.1
NCEH1
ENSSSCG00000011755
ENSG00000144959
Neutral cholesterol ester hydrolase 1
Tissue enhanced
Detected in all
heart:
73.7
NCF4
ENSSSCG00000000137
ENSG00000100365
Neutrophil cytosolic factor 4
Tissue enhanced
Detected in many
lymphoid tissue:
37.3
stomach:
29.6
NCK1
ENSSSCG00000025701
ENSG00000158092
Cytoplasmic protein NCK1
Low tissue specificity
Detected in all
NCK2
ENSSSCG00000008144
ENSG00000071051
Cytoplasmic protein NCK2
Tissue enhanced
Detected in all
lens:
92.4
NCKAP1
ENSSSCG00000016019
ENSG00000061676
NCK associated protein 1
Tissue enhanced
Detected in all
brain:
64.9
NCKAP5L
ENSSSCG00000000209
ENSG00000167566
NCK associated protein 5 like
Low tissue specificity
Detected in all
NCKIPSD
ENSSSCG00000011364
ENSG00000213672
NCK interacting protein with SH3 domain
Tissue enhanced
Detected in all
brain:
21.1
NCL
ENSSSCG00000016275
ENSG00000115053
Nucleolin
Low tissue specificity
Detected in all
NCLN
ENSSSCG00000013475
ENSG00000125912
Nicalin
Low tissue specificity
Detected in all
NCMAP
ENSSSCG00000003547
ENSG00000184454
Non-compact myelin associated protein
Group enriched
Detected in many
brain:
125.9
vagus nerve:
202.2
NCOA1
ENSSSCG00000008581
ENSG00000084676
Nuclear receptor coactivator 1
Low tissue specificity
Detected in all
NCOA2
ENSSSCG00000006194
ENSG00000140396
Nuclear receptor coactivator 2
Low tissue specificity
Detected in all
NCOA3
ENSSSCG00000007458
ENSG00000124151
Nuclear receptor coactivator 3
Low tissue specificity
Detected in all
NCOA4
ENSSSCG00000010399
ENSG00000266412
Nuclear receptor coactivator 4
Tissue enriched
Detected in all
male glands:
156.0
NCOA5
ENSSSCG00000007438
ENSG00000124160
Nuclear receptor coactivator 5
Low tissue specificity
Detected in all
NCOA6
ENSSSCG00000007284
ENSG00000198646
Nuclear receptor coactivator 6
Low tissue specificity
Detected in all
NCOA7
ENSSSCG00000004222
ENSG00000111912
Nuclear receptor coactivator 7
Low tissue specificity
Detected in all
NCOR1
ENSSSCG00000018039
ENSG00000141027
Nuclear receptor corepressor 1
Low tissue specificity
Detected in all
NCOR2
ENSSSCG00000009761
ENSG00000196498
Nuclear receptor corepressor 2
Tissue enhanced
Detected in all
cartilage:
116.3
NCS1
ENSSSCG00000039311
ENSG00000107130
Neuronal calcium sensor 1
Tissue enhanced
Detected in many
brain:
59.6
NCSTN
ENSSSCG00000006385
ENSG00000162736
Nicastrin
Low tissue specificity
Detected in all
ND1
ENSSSCG00000018065
ENSG00000198888
NADH dehydrogenase subunit 1 (mitochondrion)
Tissue enhanced
Detected in all
heart:
1382.7
ND2
ENSSSCG00000018069
ENSG00000198763
NADH-ubiquinone oxidoreductase chain 2
Tissue enhanced
Detected in all
heart:
888.1
ND3
ENSSSCG00000018084
ENSG00000198840
NADH-ubiquinone oxidoreductase chain 3
Tissue enhanced
Detected in all
heart:
1339.5
ND4
ENSSSCG00000018087
ENSG00000198886
NADH-ubiquinone oxidoreductase chain 4
Tissue enhanced
Detected in all
heart:
1220.5
ND4L
ENSSSCG00000018086
ENSG00000212907
NADH-ubiquinone oxidoreductase chain 4L
Tissue enhanced
Detected in all
heart:
1287.2
ND5
ENSSSCG00000018091
ENSG00000198786
NADH-ubiquinone oxidoreductase chain 5
Tissue enhanced
Detected in all
heart:
1058.0
ND6
ENSSSCG00000018092
ENSG00000198695
NADH-ubiquinone oxidoreductase chain 6
Tissue enhanced
Detected in all
heart:
887.1
NDC1
ENSSSCG00000028748
ENSG00000058804
NDC1 transmembrane nucleoporin
Low tissue specificity
Detected in all
NDC80
ENSSSCG00000003697
ENSG00000080986
NDC80, kinetochore complex component
Low tissue specificity
Detected in all
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