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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Keyword
Chromosome
1
2
3
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5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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16026 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
C12orf73
ENSSSCG00000032910
ENSG00000204954
Chromosome 12 open reading frame 73
Low tissue specificity
Detected in all
C12orf75
ENSSSCG00000031661
ENSG00000235162
Chromosome 12 open reading frame 75
Low tissue specificity
Detected in many
C14orf119
ENSSSCG00000002035
ENSG00000179933
Chromosome 14 open reading frame 119
Low tissue specificity
Detected in all
C14orf132
ENSSSCG00000033807
ENSG00000227051
Chromosome 14 open reading frame 132
Tissue enhanced
Detected in many
brain:
36.9
C14orf28
ENSSSCG00000030679
ENSG00000179476
Chromosome 14 open reading frame 28
Low tissue specificity
Detected in all
C14orf93
ENSSSCG00000031452
ENSG00000100802
Chromosome 14 open reading frame 93
Low tissue specificity
Detected in many
C15orf39
ENSSSCG00000001885
ENSG00000167173
Chromosome 15 open reading frame 39
Low tissue specificity
Detected in many
C15orf41
ENSSSCG00000026900
ENSG00000186073
Chromosome 15 open reading frame 41
Low tissue specificity
Detected in all
C15orf59
ENSSSCG00000001916
ENSG00000205363
Chromosome 15 open reading frame 59
Tissue enhanced
Detected in many
brain:
33.5
heart:
32.0
skeletal muscle:
17.8
C15orf61
ENSSSCG00000004954
ENSG00000189227
Chromosome 15 open reading frame 61
Tissue enhanced
Detected in many
lens:
69.9
C16orf46
ENSSSCG00000035388
ENSG00000166455
Chromosome 16 open reading frame 46
Tissue enriched
Detected in many
testis:
58.9
C16orf54
ENSSSCG00000029752
ENSG00000185905
Chromosome 16 open reading frame 54
Tissue enhanced
Detected in many
lung:
33.0
lymphoid tissue:
38.1
C16orf58
ENSSSCG00000007753
ENSG00000140688
Chromosome 16 open reading frame 58
Low tissue specificity
Detected in all
C16orf70
ENSSSCG00000040749
ENSG00000125149
Chromosome 16 open reading frame 70
Low tissue specificity
Detected in all
C16orf72
ENSSSCG00000028454
ENSG00000182831
Chromosome 16 open reading frame 72
Low tissue specificity
Detected in all
C16orf74
ENSSSCG00000002662
ENSG00000154102
Chromosome 16 open reading frame 74
Tissue enhanced
Detected in all
cervix:
91.3
C16orf86
ENSSSCG00000021711
ENSG00000159761
Chromosome 16 open reading frame 86
Tissue enriched
Detected in many
testis:
21.9
C16orf87
ENSSSCG00000022333
ENSG00000155330
Chromosome 16 open reading frame 87
Tissue enhanced
Detected in all
testis:
31.0
C16orf89
ENSSSCG00000025072
ENSG00000153446
Chromosome 16 open reading frame 89
Low tissue specificity
Detected in all
C16orf91
ENSSSCG00000038882
ENSG00000174109
Chromosome 16 open reading frame 91
Low tissue specificity
Detected in all
C17orf113
ENSSSCG00000017417
ENSG00000267221
Chromosome 17 open reading frame 113
Tissue enhanced
Detected in many
cartilage:
15.0
stomach:
20.4
C17orf50
ENSSSCG00000033580
ENSG00000270806
Chromosome 17 open reading frame 50
Low tissue specificity
Detected in many
C17orf53
ENSSSCG00000017364
ENSG00000125319
Chromosome 17 open reading frame 53
Tissue enriched
Detected in many
testis:
33.2
C17orf58
ENSSSCG00000032181
ENSG00000186665
Chromosome 17 open reading frame 58
Tissue enhanced
Detected in many
brain:
48.1
C17orf62
ENSSSCG00000017127
ENSG00000178927
Chromosome 17 open reading frame 62
Low tissue specificity
Detected in all
C17orf75
ENSSSCG00000017733
ENSG00000108666
Protein Njmu-R1
Low tissue specificity
Detected in all
C17orf78
ENSSSCG00000017696
ENSG00000278505
Chromosome 17 open reading frame 78
Low tissue specificity
Detected in all
C17orf80
ENSSSCG00000017246
ENSG00000141219
Chromosome 17 open reading frame 80
Low tissue specificity
Detected in all
C17orf98
ENSSSCG00000037753
ENSG00000275489
Chromosome 17 open reading frame 98
Tissue enriched
Detected in many
testis:
41.1
C18orf25
ENSSSCG00000004500
ENSG00000152242
Chromosome 18 open reading frame 25
Low tissue specificity
Detected in all
C18orf32
ENSSSCG00000034415
ENSG00000177576
Chromosome 18 open reading frame 32
Tissue enhanced
Detected in all
male glands:
53.3
C18orf54
ENSSSCG00000004531
ENSG00000166845
Chromosome 18 open reading frame 54
Low tissue specificity
Detected in all
C19orf12
ENSSSCG00000032153
ENSG00000131943
Chromosome 19 open reading frame 12
Low tissue specificity
Detected in all
C19orf25
ENSSSCG00000022265
ENSG00000119559
Chromosome 19 open reading frame 25
Low tissue specificity
Detected in all
C19orf44
ENSSSCG00000013859
ENSG00000105072
Chromosome 19 open reading frame 44
Low tissue specificity
Detected in all
C19orf47
ENSSSCG00000027016
ENSG00000160392
Chromosome 19 open reading frame 47
Tissue enhanced
Detected in all
heart:
38.4
skeletal muscle:
62.6
C19orf53
ENSSSCG00000013757
ENSG00000104979
Chromosome 19 open reading frame 53
Low tissue specificity
Detected in all
C19orf54
ENSSSCG00000040533
ENSG00000188493
Chromosome 19 open reading frame 54
Low tissue specificity
Detected in all
C19orf66
ENSSSCG00000013664
ENSG00000130813
Repressor of yield of DENV protein
Low tissue specificity
Detected in many
C19orf67
ENSSSCG00000013769
ENSG00000188032
Chromosome 19 open reading frame 67
Tissue enriched
Detected in many
testis:
38.0
C19orf70
ENSSSCG00000013524
ENSG00000174917
MICOS complex subunit MIC13 precursor
Low tissue specificity
Detected in all
C19orf71
ENSSSCG00000013482
ENSG00000183397
Chromosome 19 open reading frame 71
Tissue enriched
Detected in some
testis:
100.7
C19orf81
ENSSSCG00000037098
ENSG00000235034
Chromosome 19 open reading frame 81
Low tissue specificity
Detected in all
C19orf84
ENSSSCG00000039649
ENSG00000262874
Chromosome 19 open reading frame 84
Group enriched
Detected in many
cervix:
6.4
lens:
24.1
C1GALT1C1L
ENSSSCG00000032888
ENSG00000223658
C1GALT1-specific chaperone 1 like
Low tissue specificity
Detected in many
C1orf109
ENSSSCG00000039905
ENSG00000116922
Chromosome 1 open reading frame 109
Low tissue specificity
Detected in all
C1orf112
ENSSSCG00000006284
ENSG00000000460
Chromosome 1 open reading frame 112
Low tissue specificity
Detected in all
C1orf115
ENSSSCG00000027882
ENSG00000162817
Chromosome 1 open reading frame 115
Tissue enhanced
Detected in many
small intestine:
52.4
C1orf122
ENSSSCG00000038888
ENSG00000197982
Chromosome 1 open reading frame 122
Tissue enhanced
Detected in all
lens:
64.4
C1orf123
ENSSSCG00000003850
ENSG00000162384
Chromosome 1 open reading frame 123
Low tissue specificity
Detected in all
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