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Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Chromosome
1
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Lymphoid tissue
Male glands
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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15222 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ZNF740
ENSSSCG00000036564
ENSG00000139651
Zinc finger protein 740
Low tissue specificity
Detected in all
ZNF746
ENSSSCG00000025752
ENSG00000181220
Zinc finger protein 746
Low tissue specificity
Detected in all
ZNF750
ENSSSCG00000017135
ENSG00000141579
Zinc finger protein 750
Tissue enhanced
Detected in many
male glands:
31.9
salivary gland:
42.0
skin:
28.1
ZNF75D
ENSSSCG00000012689
ENSG00000186376
Zinc finger protein 75D
Low tissue specificity
Detected in all
ZNF76
ENSSSCG00000001537
ENSG00000065029
Zinc finger protein 76
Low tissue specificity
Detected in all
ZNF768
ENSSSCG00000023349
ENSG00000169957
Zinc finger protein 768
Low tissue specificity
Detected in all
ZNF770
ENSSSCG00000004799
ENSG00000198146
Zinc finger protein 770
Low tissue specificity
Detected in all
ZNF771
ENSSSCG00000040745
ENSG00000179965
Zinc finger protein 771
Low tissue specificity
Detected in all
ZNF772
ENSSSCG00000038250
ENSG00000197128
Zinc finger protein 772
Low tissue specificity
Detected in all
ZNF777
ENSSSCG00000016775
ENSG00000196453
Zinc finger protein 777
Low tissue specificity
Detected in all
ZNF782
ENSSSCG00000011167
ENSG00000196597
Zinc finger protein 782
Low tissue specificity
Detected in all
ZNF784
ENSSSCG00000037024
ENSG00000179922
Zinc finger protein 784
Low tissue specificity
Detected in all
ZNF786
ENSSSCG00000015450
ENSG00000197362
Zinc finger protein 786
Low tissue specificity
Detected in all
ZNF787
ENSSSCG00000003317
ENSG00000142409
Zinc finger protein 787
Low tissue specificity
Detected in all
ZNF789
ENSSSCG00000007618
ENSG00000198556
Zinc finger protein 789
Tissue enhanced
Detected in all
male glands:
43.3
ZNF79
ENSSSCG00000005611
ENSG00000196152
Zinc finger protein 79
Low tissue specificity
Detected in all
ZNF790
ENSSSCG00000030256
ENSG00000197863
Zinc finger protein 790
Tissue enhanced
Detected in many
brain:
15.4
pituitary gland:
8.2
retina:
8.4
ZNF791
ENSSSCG00000029347
ENSG00000173875
Zinc finger protein 791
Tissue enhanced
Detected in all
liver:
24.0
ZNF792
ENSSSCG00000036886
ENSG00000180884
Zinc finger protein 792
Low tissue specificity
Detected in many
ZNF8
ENSSSCG00000040038
ENSG00000278129
Zinc finger protein 8
Low tissue specificity
Detected in all
ZNF800
ENSSSCG00000024157
ENSG00000048405
Zinc finger protein 800
Low tissue specificity
Detected in all
ZNF805
ENSSSCG00000036601
ENSG00000204524
Zinc finger protein 805
Low tissue specificity
Detected in all
ZNF81
ENSSSCG00000012283
ENSG00000197779
Zinc finger protein 81
Low tissue specificity
Detected in all
ZNF821
ENSSSCG00000002741
ENSG00000102984
Zinc finger protein 821
Low tissue specificity
Detected in all
ZNF827
ENSSSCG00000009037
ENSG00000151612
Zinc finger protein 827
Low tissue specificity
Detected in all
ZNF835
ENSSSCG00000040067
ENSG00000127903
Zinc finger protein 835
Low tissue specificity
Detected in all
ZNF852
ENSSSCG00000022462
ENSG00000178917
Zinc finger protein 852
Low tissue specificity
Detected in all
ZNF853
ENSSSCG00000037890
ENSG00000236609
Zinc finger protein 853
Low tissue specificity
Detected in all
ZNF862
ENSSSCG00000040257
ENSG00000106479
Zinc finger protein 862
Low tissue specificity
Detected in all
ZNF865
ENSSSCG00000029156
ENSG00000261221
Zinc finger protein 865
Low tissue specificity
Detected in all
ZNF891
ENSSSCG00000037951
ENSG00000214029
Zinc finger protein 891
Low tissue specificity
Detected in all
ZNFX1
ENSSSCG00000030108
ENSG00000124201
Zinc finger NFX1-type containing 1
Low tissue specificity
Detected in all
ZNHIT1
ENSSSCG00000033982
ENSG00000106400
Zinc finger HIT-type containing 1
Low tissue specificity
Detected in all
ZNHIT2
ENSSSCG00000013003
ENSG00000174276
Zinc finger HIT-type containing 2
Tissue enhanced
Detected in all
testis:
51.9
ZNHIT3
ENSSSCG00000023373
ENSG00000273611
Zinc finger HIT-type containing 3
Low tissue specificity
Detected in all
ZNHIT6
ENSSSCG00000006939
ENSG00000117174
Box C/D snoRNA protein 1
Low tissue specificity
Detected in all
ZNRD1
ENSSSCG00000001245
ENSG00000066379
DNA-directed RNA polymerase I subunit RPA12
Low tissue specificity
Detected in all
ZNRF1
ENSSSCG00000031462
ENSG00000186187
Zinc and ring finger 1
Tissue enhanced
Detected in all
lymphoid tissue:
75.2
ZNRF2
ENSSSCG00000037116
ENSG00000180233
Zinc and ring finger 2
Low tissue specificity
Detected in all
ZNRF3
ENSSSCG00000009971
ENSG00000183579
Zinc and ring finger 3
Tissue enhanced
Detected in all
epididymis:
34.9
ZPBP
ENSSSCG00000015627
ENSG00000042813
Zona pellucida-binding protein 1 precursor
Tissue enriched
Detected in some
testis:
75.7
ZPBP2
ENSSSCG00000017493
ENSG00000186075
Zona pellucida-binding protein 2 precursor
Tissue enriched
Detected in all
testis:
56.0
ZPLD1
ENSSSCG00000011947
ENSG00000170044
Zona pellucida like domain containing 1
Low tissue specificity
Detected in all
ZRANB1
ENSSSCG00000010738
ENSG00000019995
Zinc finger RANBP2-type containing 1
Low tissue specificity
Detected in all
ZRANB2
ENSSSCG00000003787
ENSG00000132485
Zinc finger Ran-binding domain-containing protein 2
Low tissue specificity
Detected in all
ZRANB3
ENSSSCG00000015694
ENSG00000121988
Zinc finger RANBP2-type containing 3
Low tissue specificity
Detected in all
ZSCAN12
ENSSSCG00000001209
ENSG00000158691
Zinc finger and SCAN domain containing 12
Low tissue specificity
Detected in all
ZSCAN16
ENSSSCG00000022664
ENSG00000196812
Zinc finger and SCAN domain containing 16
Low tissue specificity
Detected in all
ZSCAN2
ENSSSCG00000036356
ENSG00000176371
Zinc finger and SCAN domain containing 2
Low tissue specificity
Detected in all
ZSCAN20
ENSSSCG00000003621
ENSG00000121903
Zinc finger and SCAN domain containing 20
Low tissue specificity
Detected in all
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