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Keyword
Chromosome
1
2
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6
7
8
9
10
11
12
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
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Lymphoid tissue
Male glands
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Mouth
Skin
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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15100 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
NR2F1
ENSSSCG00000014157
ENSG00000175745
Nuclear receptor subfamily 2 group F member 1
Low tissue specificity
Detected in many
NR2F2
ENSSSCG00000002254
ENSG00000185551
COUP transcription factor 2 isoform 2
Low tissue specificity
Detected in all
NR2F6
ENSSSCG00000013873
ENSG00000160113
Nuclear receptor subfamily 2 group F member 6
Tissue enhanced
Detected in all
stomach:
103.6
NR3C1
ENSSSCG00000014401
ENSG00000113580
Glucocorticoid receptor
Low tissue specificity
Detected in all
NR3C2
ENSSSCG00000037766
ENSG00000151623
Nuclear receptor subfamily 3 group C member 2
Low tissue specificity
Detected in all
NR4A1
ENSSSCG00000031321
ENSG00000123358
Nuclear receptor subfamily 4 group A member 1
Tissue enhanced
Detected in many
cartilage:
138.9
NR6A1
ENSSSCG00000005589
ENSG00000148200
Nuclear receptor subfamily 6 group A member 1
Tissue enhanced
Detected in all
testis:
33.8
NRARP
ENSSSCG00000005844
ENSG00000198435
NOTCH regulated ankyrin repeat protein
Tissue enhanced
Detected in all
testis:
90.1
urinary bladder:
83.9
NRAS
ENSSSCG00000032477
GTPase NRas
Low tissue specificity
Detected in all
NRBF2
ENSSSCG00000024081
ENSG00000148572
Nuclear receptor binding factor 2
Low tissue specificity
Detected in all
NRBP1
ENSSSCG00000022454
ENSG00000115216
Nuclear receptor-binding protein
Low tissue specificity
Detected in all
NRBP2
ENSSSCG00000038025
ENSG00000185189
Nuclear receptor binding protein 2
Tissue enhanced
Detected in all
skin:
71.1
vagus nerve:
80.9
NRDC
ENSSSCG00000003870
ENSG00000078618
Nardilysin convertase
Low tissue specificity
Detected in all
NRDE2
ENSSSCG00000002434
ENSG00000119720
NRDE-2, necessary for RNA interference, domain containing
Low tissue specificity
Detected in all
NRF1
ENSSSCG00000016566
ENSG00000106459
Nuclear respiratory factor 1
Low tissue specificity
Detected in all
NRG4
ENSSSCG00000001860
ENSG00000169752
Neuregulin 4
Tissue enhanced
Detected in many
brain:
66.0
male glands:
67.5
NRGN
ENSSSCG00000039322
ENSG00000154146
Neurogranin
Tissue enriched
Detected in many
brain:
320.1
NRIP1
ENSSSCG00000021038
ENSG00000180530
Nuclear receptor interacting protein 1
Tissue enhanced
Detected in all
cervix:
95.1
NRIP2
ENSSSCG00000000741
ENSG00000053702
Nuclear receptor interacting protein 2
Low tissue specificity
Detected in many
NRM
ENSSSCG00000023639
ENSG00000137404
Nurim
Tissue enriched
Detected in many
testis:
74.2
NRP1
ENSSSCG00000011102
ENSG00000099250
Neuropilin 1
Tissue enhanced
Detected in many
adrenal gland:
79.8
NRP2
ENSSSCG00000026383
ENSG00000118257
Neuropilin 2
Tissue enhanced
Detected in many
smooth muscle:
71.2
NRROS
ENSSSCG00000023527
ENSG00000174004
Negative regulator of reactive oxygen species
Tissue enhanced
Detected in many
lymphoid tissue:
25.6
NRSN1
ENSSSCG00000021696
ENSG00000152954
Neurensin 1
Tissue enriched
Detected in many
brain:
50.9
NRSN2
ENSSSCG00000031519
ENSG00000125841
Neurensin 2
Tissue enhanced
Detected in all
brain:
24.3
NRXN1
ENSSSCG00000008419
ENSG00000179915
Neurexin 1
Tissue enhanced
Detected in many
bone marrow:
25.5
brain:
62.7
pituitary gland:
24.4
NSD1
ENSSSCG00000014044
ENSG00000165671
Nuclear receptor binding SET domain protein 1
Low tissue specificity
Detected in all
NSD2
ENSSSCG00000008682
ENSG00000109685
Nuclear receptor binding SET domain protein 2
Low tissue specificity
Detected in all
NSD3
ENSSSCG00000015820
ENSG00000147548
Nuclear receptor binding SET domain protein 3
Low tissue specificity
Detected in all
NSDHL
ENSSSCG00000012758
ENSG00000147383
Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
Tissue enhanced
Detected in all
testis:
52.1
NSF
ENSSSCG00000017316
ENSG00000073969
Vesicle-fusing ATPase
Group enriched
Detected in all
brain:
64.6
pineal gland:
31.4
pituitary gland:
17.8
retina:
24.6
NSFL1C
ENSSSCG00000007187
ENSG00000088833
NSFL1 cofactor p47
Tissue enriched
Detected in all
lens:
121.8
NSG1
ENSSSCG00000024892
ENSG00000168824
Neuronal vesicle trafficking associated 1
Tissue enhanced
Detected in many
brain:
56.3
pineal gland:
28.5
pituitary gland:
27.4
NSL1
ENSSSCG00000015593
ENSG00000117697
NSL1, MIS12 kinetochore complex component
Low tissue specificity
Detected in all
NSMAF
ENSSSCG00000006236
ENSG00000035681
Neutral sphingomyelinase activation associated factor
Low tissue specificity
Detected in all
NSMCE1
ENSSSCG00000036275
ENSG00000169189
NSE1 homolog, SMC5-SMC6 complex component
Low tissue specificity
Detected in all
NSMCE2
ENSSSCG00000037755
ENSG00000156831
NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase
Low tissue specificity
Detected in all
NSMCE4A
ENSSSCG00000010700
ENSG00000107672
NSE4 homolog A, SMC5-SMC6 complex component
Low tissue specificity
Detected in all
NSMF
ENSSSCG00000037880
ENSG00000165802
NMDA receptor synaptonuclear signaling and neuronal migration factor
Tissue enhanced
Detected in all
brain:
71.4
NSRP1
ENSSSCG00000017795
ENSG00000126653
Nuclear speckle splicing regulatory protein 1
Low tissue specificity
Detected in all
NSUN2
ENSSSCG00000017104
ENSG00000037474
NOP2/Sun RNA methyltransferase family member 2
Low tissue specificity
Detected in all
NSUN3
ENSSSCG00000027432
ENSG00000178694
NOP2/Sun RNA methyltransferase family member 3
Tissue enhanced
Detected in all
male glands:
24.8
NSUN4
ENSSSCG00000038280
ENSG00000117481
NOP2/Sun RNA methyltransferase family member 4
Tissue enriched
Detected in all
testis:
60.1
NSUN5
ENSSSCG00000007704
ENSG00000130305
NOP2/Sun RNA methyltransferase family member 5
Low tissue specificity
Detected in all
NSUN7
ENSSSCG00000024496
ENSG00000179299
NOP2/Sun RNA methyltransferase family member 7
Tissue enhanced
Detected in some
choroid plexus:
16.3
testis:
46.9
upper respiratory system:
19.9
NT5C
ENSSSCG00000028210
ENSG00000125458
5', 3'-nucleotidase, cytosolic
Low tissue specificity
Detected in all
NT5C2
ENSSSCG00000010594
ENSG00000076685
5'-nucleotidase, cytosolic II
Low tissue specificity
Detected in all
NT5C3B
ENSSSCG00000034779
ENSG00000141698
5'-nucleotidase, cytosolic IIIB
Tissue enhanced
Detected in all
brain:
32.1
NT5DC1
ENSSSCG00000004435
ENSG00000178425
5'-nucleotidase domain containing 1
Tissue enhanced
Detected in all
large intestine:
34.0
pineal gland:
29.9
NT5DC2
ENSSSCG00000011444
ENSG00000168268
5'-nucleotidase domain containing 2
Tissue enriched
Detected in all
lens:
131.7
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