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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Digestive system diseases
Endocrine and metabolic diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Skin diseases
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Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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14558 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000025028
ENSG00000101966
E3 ubiquitin-protein ligase XIAP
Tissue enhanced
Detected in all
pineal gland:
66.2
na
ENSSSCG00000025041
Low tissue specificity
Detected in all
na
ENSSSCG00000025060
ENSG00000106591
Low tissue specificity
Detected in all
na
ENSSSCG00000025067
ENSG00000145194,ENSG00000284917
Tissue enhanced
Detected in many
adrenal gland:
15.0
brain:
30.3
pineal gland:
11.7
na
ENSSSCG00000025106
ENSG00000144115
Low tissue specificity
Detected in all
na
ENSSSCG00000025107
Low tissue specificity
Detected in all
na
ENSSSCG00000025151
Vacuolar protein sorting-associated protein 4A
Low tissue specificity
Detected in all
na
ENSSSCG00000025187
ENSG00000171202
Transmembrane protein 126A
Low tissue specificity
Detected in all
na
ENSSSCG00000025192
60S ribosomal protein L9
Low tissue specificity
Detected in all
na
ENSSSCG00000025203
Low tissue specificity
Detected in all
na
ENSSSCG00000025207
Tissue enhanced
Detected in many
skin:
27.3
na
ENSSSCG00000025209
Low tissue specificity
Detected in all
na
ENSSSCG00000025253
ENSG00000183878
Low tissue specificity
Detected in all
na
ENSSSCG00000025254
ENSG00000197566
Low tissue specificity
Detected in all
na
ENSSSCG00000025281
ENSG00000170540,ENSG00000260342
ADP-ribosylation factor-like protein 6-interacting protein 1
Low tissue specificity
Detected in all
na
ENSSSCG00000025305
ENSG00000171865
Ribonuclease H1
Low tissue specificity
Detected in all
na
ENSSSCG00000025316
Acetyl-coenzyme A transporter 1
Low tissue specificity
Detected in all
na
ENSSSCG00000025387
Tissue enhanced
Detected in many
brain:
12.3
na
ENSSSCG00000025499
ENSG00000089327
Tissue enhanced
Detected in many
lymphoid tissue:
54.0
na
ENSSSCG00000025502
ENSG00000158710
Low tissue specificity
Detected in all
na
ENSSSCG00000025508
Low tissue specificity
Detected in many
na
ENSSSCG00000025525
ENSG00000160221,ENSG00000276612,ENSG00000280071
Tissue enhanced
Detected in all
heart:
61.0
na
ENSSSCG00000025557
Tissue enhanced
Detected in many
vagus nerve:
59.7
na
ENSSSCG00000025565
ENSG00000103226,ENSG00000103512,ENSG00000185164
Low tissue specificity
Detected in all
na
ENSSSCG00000025590
Low tissue specificity
Detected in all
na
ENSSSCG00000025593
ENSG00000204267,ENSG00000250264
Antigen peptide transporter 2
Low tissue specificity
Detected in many
na
ENSSSCG00000025631
Tissue enhanced
Detected in all
lymphoid tissue:
64.6
na
ENSSSCG00000025644
T-cell surface glycoprotein CD1a precursor
Tissue enriched
Detected in all
lymphoid tissue:
108.6
na
ENSSSCG00000025672
ENSG00000162437
Tissue enhanced
Detected in many
male glands:
39.6
na
ENSSSCG00000025673
ENSG00000101363
Low tissue specificity
Detected in all
na
ENSSSCG00000025885
ENSG00000179914
Intelectin-2-like precursor
Group enriched
Detected in many
large intestine:
26.7
small intestine:
21.6
upper respiratory system:
77.6
na
ENSSSCG00000025913
Low tissue specificity
Detected in all
na
ENSSSCG00000025921
ENSG00000163900
Low tissue specificity
Detected in all
na
ENSSSCG00000025940
ENSG00000122674,ENSG00000146574
Low tissue specificity
Detected in all
na
ENSSSCG00000026045
Low tissue specificity
Detected in all
na
ENSSSCG00000026051
Low tissue specificity
Detected in all
na
ENSSSCG00000026064
Low tissue specificity
Detected in all
na
ENSSSCG00000026140
ENSG00000160307
Tissue enriched
Detected in many
brain:
149.5
na
ENSSSCG00000026167
ENSG00000100934
Low tissue specificity
Detected in all
na
ENSSSCG00000026196
Low tissue specificity
Detected in all
na
ENSSSCG00000026229
Low tissue specificity
Detected in all
na
ENSSSCG00000026271
Tissue enhanced
Detected in many
ductus deferens:
14.8
epididymis:
9.1
male glands:
18.1
na
ENSSSCG00000026354
ENSG00000165630,ENSG00000282246
Pre-mRNA-splicing factor 18
Low tissue specificity
Detected in all
na
ENSSSCG00000026402
Low tissue specificity
Detected in all
na
ENSSSCG00000026446
Low tissue specificity
Detected in all
na
ENSSSCG00000026449
ENSG00000066135
Low tissue specificity
Detected in all
na
ENSSSCG00000026457
Tissue enhanced
Detected in many
brain:
39.6
cornea:
33.2
vagus nerve:
15.2
na
ENSSSCG00000026486
GRAM domain containing 2-like
Tissue enhanced
Detected in many
epididymis:
18.3
lung:
13.4
na
ENSSSCG00000026488
ENSG00000170142
Low tissue specificity
Detected in all
na
ENSSSCG00000026498
ENSG00000179912
Low tissue specificity
Detected in all
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