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Human disease related genes
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UMAP gene cluster
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Keyword
Chromosome
1
2
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7
8
9
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11
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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15211 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
NDUFA10
ENSSSCG00000016349
ENSG00000130414
NADH:ubiquinone oxidoreductase subunit A10
Low tissue specificity
Detected in all
NDUFA11
ENSSSCG00000027307
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFA13
ENSSSCG00000013936
ENSG00000186010
NADH dehydrogenase
Tissue enhanced
Detected in all
testis:
78.2
NDUFA4L2
ENSSSCG00000027621
ENSG00000185633
NADH dehydrogenase
Tissue enriched
Detected in many
cartilage:
82.0
NDUFA6
ENSSSCG00000000045
ENSG00000184983
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFA8
ENSSSCG00000005528
ENSG00000119421
NADH dehydrogenase
Tissue enhanced
Detected in all
pineal gland:
49.0
NDUFAF1
ENSSSCG00000004748
ENSG00000137806
NADH:ubiquinone oxidoreductase complex assembly factor 1
Low tissue specificity
Detected in all
NDUFAF2
ENSSSCG00000027763
ENSG00000164182
NADH:ubiquinone oxidoreductase complex assembly factor 2
Low tissue specificity
Detected in all
NDUFAF3
ENSSSCG00000011371
ENSG00000178057
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFAF5
ENSSSCG00000007076
ENSG00000101247
NADH:ubiquinone oxidoreductase complex assembly factor 5
Tissue enhanced
Detected in all
testis:
22.7
NDUFAF6
ENSSSCG00000006093
ENSG00000156170
NADH:ubiquinone oxidoreductase complex assembly factor 6
Low tissue specificity
Detected in all
NDUFAF7
ENSSSCG00000008494
ENSG00000003509
NADH:ubiquinone oxidoreductase complex assembly factor 7
Low tissue specificity
Detected in all
NDUFB10
ENSSSCG00000030328
ENSG00000140990
NADH:ubiquinone oxidoreductase subunit B10
Low tissue specificity
Detected in all
NDUFB11
ENSSSCG00000034487
ENSG00000147123
NADH:ubiquinone oxidoreductase subunit B11
Low tissue specificity
Detected in all
NDUFB2
ENSSSCG00000032390
ENSG00000090266
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFB7
ENSSSCG00000013778
ENSG00000099795
NADH:ubiquinone oxidoreductase subunit B7
Low tissue specificity
Detected in all
NDUFB8
ENSSSCG00000006166
NADH dehydrogenase
Tissue enhanced
Detected in all
lens:
60.6
NDUFB9
ENSSSCG00000005976
ENSG00000147684
NADH:ubiquinone oxidoreductase subunit B9
Tissue enhanced
Detected in all
skeletal muscle:
173.3
NDUFC1
ENSSSCG00000037953
ENSG00000109390
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFC2
ENSSSCG00000039494
ENSG00000151366,ENSG00000259112
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFS1
ENSSSCG00000016127
ENSG00000023228
NADH:ubiquinone oxidoreductase core subunit S1
Tissue enhanced
Detected in all
skeletal muscle:
68.8
NDUFS2
ENSSSCG00000006358
ENSG00000158864
NADH:ubiquinone oxidoreductase core subunit S2
Tissue enhanced
Detected in all
skeletal muscle:
66.4
NDUFS3
ENSSSCG00000032081
ENSG00000213619
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFS4
ENSSSCG00000016893
ENSG00000164258
NADH:ubiquinone oxidoreductase subunit S4
Low tissue specificity
Detected in all
NDUFS5
ENSSSCG00000003653
ENSG00000168653
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFS6
ENSSSCG00000017114
ENSG00000145494
NADH:ubiquinone oxidoreductase subunit S6
Tissue enhanced
Detected in all
heart:
63.1
NDUFS7
ENSSSCG00000024144
ENSG00000115286
NADH:ubiquinone oxidoreductase core subunit S7
Tissue enhanced
Detected in all
heart:
76.0
skeletal muscle:
98.1
NDUFS8
ENSSSCG00000037455
ENSG00000110717
NADH:ubiquinone oxidoreductase core subunit S8
Tissue enhanced
Detected in all
heart:
90.4
skeletal muscle:
126.3
NDUFV1
ENSSSCG00000012896
ENSG00000167792
NADH:ubiquinone oxidoreductase core subunit V1
Tissue enhanced
Detected in all
heart:
40.4
skeletal muscle:
39.1
NDUFV2
ENSSSCG00000038826
ENSG00000178127
Tissue enhanced
Detected in all
lens:
129.7
NDUFV3
ENSSSCG00000021991
ENSG00000160194
NADH:ubiquinone oxidoreductase subunit V3
Low tissue specificity
Detected in all
NEB
ENSSSCG00000016397
ENSG00000183091
Nebulin
Tissue enriched
Detected in some
skeletal muscle:
369.6
NEBL
ENSSSCG00000011090
ENSG00000078114
Nebulette
Tissue enriched
Detected in many
heart:
215.3
NECAP1
ENSSSCG00000025179
ENSG00000089818
NECAP endocytosis associated 1
Tissue enhanced
Detected in all
pituitary gland:
46.3
NECAP2
ENSSSCG00000003477
ENSG00000157191
NECAP endocytosis associated 2
Tissue enhanced
Detected in all
lens:
77.8
NECTIN2
ENSSSCG00000003090
ENSG00000130202
Nectin-2 precursor
Low tissue specificity
Detected in all
NECTIN3
ENSSSCG00000011933
ENSG00000177707
Nectin cell adhesion molecule 3
Group enriched
Detected in all
lens:
124.3
liver:
50.2
male glands:
31.6
testis:
60.3
NEDD1
ENSSSCG00000000890
ENSG00000139350
Neural precursor cell expressed, developmentally down-regulated 1
Low tissue specificity
Detected in all
NEDD4
ENSSSCG00000037499
ENSG00000069869
Neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
Low tissue specificity
Detected in all
NEDD4L
ENSSSCG00000004919
ENSG00000049759
Neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
Low tissue specificity
Detected in all
NEDD8
ENSSSCG00000031938
ENSG00000129559
Neural precursor cell expressed, developmentally down-regulated 8
Low tissue specificity
Detected in all
NEDD8-MDP1
ENSSSCG00000033006
ENSG00000255526
NEDD8-MDP1 readthrough
Low tissue specificity
Detected in all
NEIL1
ENSSSCG00000001882
ENSG00000140398
Nei like DNA glycosylase 1
Tissue enhanced
Detected in all
kidney:
36.0
liver:
51.3
NEIL2
ENSSSCG00000028699
ENSG00000154328
Nei like DNA glycosylase 2
Low tissue specificity
Detected in all
NEIL3
ENSSSCG00000015771
ENSG00000109674
Nei like DNA glycosylase 3
Tissue enhanced
Detected in many
adrenal gland:
13.5
lymphoid tissue:
13.5
NEK1
ENSSSCG00000009714
ENSG00000137601
NIMA related kinase 1
Tissue enhanced
Detected in all
lens:
79.8
NEK11
ENSSSCG00000011181
ENSG00000114670
NIMA related kinase 11
Tissue enhanced
Detected in many
choroid plexus:
19.0
fallopian tube:
18.4
NEK2
ENSSSCG00000015604
ENSG00000117650
NIMA related kinase 2
Tissue enriched
Detected in many
testis:
54.1
NEK3
ENSSSCG00000009379
ENSG00000136098
NIMA related kinase 3
Low tissue specificity
Detected in all
NEK4
ENSSSCG00000011446
ENSG00000114904
NIMA related kinase 4
Low tissue specificity
Detected in all
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