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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
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Keyword
Chromosome
1
2
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5
6
7
8
9
10
11
12
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14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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15044 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
FANK1
ENSSSCG00000010745
ENSG00000203780
Fibronectin type III and ankyrin repeat domains 1
Tissue enhanced
Detected in many
fallopian tube:
27.3
testis:
29.2
upper respiratory system:
19.1
FAP
ENSSSCG00000015896
ENSG00000078098
Fibroblast activation protein alpha
Tissue enriched
Detected in many
cartilage:
50.6
FAR1
ENSSSCG00000021170
ENSG00000197601
Fatty acyl-CoA reductase 1
Tissue enhanced
Detected in all
male glands:
76.8
FAR2
ENSSSCG00000000541
ENSG00000064763
Fatty acyl-CoA reductase 2
Tissue enhanced
Detected in all
pineal gland:
29.7
FARP1
ENSSSCG00000026863
ENSG00000152767
FERM, ARH/RhoGEF and pleckstrin domain protein 1
Low tissue specificity
Detected in all
FARP2
ENSSSCG00000016368
ENSG00000006607
FERM, ARH/RhoGEF and pleckstrin domain protein 2
Tissue enhanced
Detected in all
salivary gland:
46.4
FARS2
ENSSSCG00000038717
ENSG00000145982
Phenylalanyl-tRNA synthetase 2, mitochondrial
Low tissue specificity
Detected in all
FARSA
ENSSSCG00000013745
ENSG00000179115
Phenylalanyl-tRNA synthetase alpha subunit
Low tissue specificity
Detected in all
FAS
ENSSSCG00000010448
ENSG00000026103
Tumor necrosis factor receptor superfamily member 6 precursor
Low tissue specificity
Detected in all
FASLG
ENSSSCG00000022226
ENSG00000117560
Tumor necrosis factor ligand superfamily member 6
Tissue enhanced
Detected in all
lymphoid tissue:
16.0
stomach:
16.2
FASN
ENSSSCG00000029944
ENSG00000169710
Fatty acid synthase
Tissue enhanced
Detected in all
adipose tissue:
297.2
aorta:
259.1
bone marrow:
111.4
FASTK
ENSSSCG00000024184
ENSG00000164896
Fas-activated serine/threonine kinase
Low tissue specificity
Detected in all
FASTKD1
ENSSSCG00000015933
ENSG00000138399
FAST kinase domains 1
Low tissue specificity
Detected in all
FASTKD2
ENSSSCG00000016134
ENSG00000118246
FAST kinase domains 2
Low tissue specificity
Detected in all
FASTKD3
ENSSSCG00000017099
ENSG00000124279
FAST kinase domains 3
Low tissue specificity
Detected in all
FAT1
ENSSSCG00000007000
ENSG00000083857
FAT tumor suppressor homolog 1
Tissue enhanced
Detected in all
lens:
86.3
FAT4
ENSSSCG00000036155
ENSG00000196159
FAT atypical cadherin 4
Low tissue specificity
Detected in many
FAU
ENSSSCG00000039740
ENSG00000149806
FAU, ubiquitin like and ribosomal protein S30 fusion
Low tissue specificity
Detected in all
FAXC
ENSSSCG00000004349
ENSG00000146267
Failed axon connections homolog
Tissue enhanced
Detected in all
brain:
33.7
FAXDC2
ENSSSCG00000017068
ENSG00000170271
Fatty acid hydroxylase domain containing 2
Low tissue specificity
Detected in all
FBF1
ENSSSCG00000017197
ENSG00000188878
Fas binding factor 1
Tissue enhanced
Detected in all
testis:
61.1
FBL
ENSSSCG00000030510
ENSG00000105202
Fibrillarin
Low tissue specificity
Detected in all
FBLIM1
ENSSSCG00000003465
ENSG00000162458
Filamin binding LIM protein 1
Low tissue specificity
Detected in all
FBLN1
ENSSSCG00000000010
ENSG00000077942
Fibulin 1
Tissue enhanced
Detected in all
cartilage:
101.9
FBLN2
ENSSSCG00000011609
ENSG00000163520
Fibulin 2
Tissue enhanced
Detected in all
mesothelial tissue:
88.7
FBLN5
ENSSSCG00000002444
ENSG00000140092
Fibulin 5
Tissue enhanced
Detected in many
ovary:
46.7
FBLN7
ENSSSCG00000008101
ENSG00000144152
Fibulin 7
Tissue enriched
Detected in many
cartilage:
150.7
FBN1
ENSSSCG00000004658
ENSG00000166147
Fibrillin-1 precursor
Tissue enhanced
Detected in many
mesothelial tissue:
106.5
FBN2
ENSSSCG00000014256
ENSG00000138829
Fibrillin 2
Tissue enhanced
Detected in many
cartilage:
18.2
ductus deferens:
24.9
pituitary gland:
20.0
FBP1
ENSSSCG00000031174
ENSG00000165140
Fructose-1,6-bisphosphatase 1
Tissue enhanced
Detected in all
kidney:
61.0
liver:
48.3
FBRS
ENSSSCG00000025794
ENSG00000156860
Fibrosin
Low tissue specificity
Detected in all
FBXL12
ENSSSCG00000013670
ENSG00000127452
F-box and leucine rich repeat protein 12
Low tissue specificity
Detected in all
FBXL13
ENSSSCG00000037822
ENSG00000161040
F-box and leucine rich repeat protein 13
Low tissue specificity
Detected in all
FBXL14
ENSSSCG00000039474
ENSG00000171823
F-box and leucine rich repeat protein 14
Low tissue specificity
Detected in all
FBXL15
ENSSSCG00000038504
ENSG00000107872
F-box and leucine rich repeat protein 15
Low tissue specificity
Detected in all
FBXL17
ENSSSCG00000014190
ENSG00000145743
F-box and leucine rich repeat protein 17
Low tissue specificity
Detected in all
FBXL18
ENSSSCG00000038526
ENSG00000155034
F-box and leucine rich repeat protein 18
Low tissue specificity
Detected in all
FBXL19
ENSSSCG00000028186
ENSG00000099364
F-box and leucine rich repeat protein 19
Low tissue specificity
Detected in all
FBXL2
ENSSSCG00000039802
ENSG00000153558
F-box and leucine rich repeat protein 2
Tissue enhanced
Detected in many
lens:
18.6
FBXL20
ENSSSCG00000017506
ENSG00000108306
F-box and leucine rich repeat protein 20
Low tissue specificity
Detected in all
FBXL3
ENSSSCG00000009472
ENSG00000005812
F-box and leucine rich repeat protein 3
Low tissue specificity
Detected in all
FBXL4
ENSSSCG00000004347
ENSG00000112234
F-box/LRR-repeat protein 4
Low tissue specificity
Detected in all
FBXL5
ENSSSCG00000008740
ENSG00000118564
F-box and leucine rich repeat protein 5
Low tissue specificity
Detected in all
FBXL7
ENSSSCG00000028239
ENSG00000183580
F-box and leucine rich repeat protein 7
Low tissue specificity
Detected in many
FBXO10
ENSSSCG00000005350
ENSG00000147912
F-box protein 10
Tissue enhanced
Detected in all
epididymis:
26.5
FBXO11
ENSSSCG00000029485
ENSG00000138081
F-box protein 11
Low tissue specificity
Detected in all
FBXO17
ENSSSCG00000038805
ENSG00000269190
F-box protein 17
Low tissue specificity
Detected in all
FBXO18
ENSSSCG00000030030
ENSG00000134452
F-box protein, helicase, 18
Low tissue specificity
Detected in all
FBXO21
ENSSSCG00000009858
ENSG00000135108
F-box only protein 21
Low tissue specificity
Detected in all
FBXO22
ENSSSCG00000027457
ENSG00000167196
F-box protein 22
Low tissue specificity
Detected in all
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