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Human disease related genes
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UMAP gene cluster
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Keyword
Chromosome
1
2
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6
7
8
9
10
11
12
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14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
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TISSUE SPECIFIC PROTEOME
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15044 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
DAPP1
ENSSSCG00000039327
ENSG00000070190
Dual adaptor of phosphotyrosine and 3-phosphoinositides 1
Tissue enhanced
Detected in many
lymphoid tissue:
41.9
upper respiratory system:
23.0
DARS
ENSSSCG00000015689
ENSG00000115866
Aspartyl-tRNA synthetase
Low tissue specificity
Detected in all
DARS2
ENSSSCG00000015492
ENSG00000117593
Aspartyl-tRNA synthetase 2, mitochondrial
Low tissue specificity
Detected in all
DAXX
ENSSSCG00000001509
ENSG00000204209
Death domain associated protein
Low tissue specificity
Detected in all
DAZAP1
ENSSSCG00000022528
ENSG00000071626
DAZ-associated protein 1
Low tissue specificity
Detected in all
DAZAP2
ENSSSCG00000022674
ENSG00000183283
DAZ-associated protein 2
Low tissue specificity
Detected in all
DBI
ENSSSCG00000032213
ENSG00000155368
Acyl-CoA-binding protein DBI(32-86)
Tissue enhanced
Detected in all
brain:
215.4
DBN1
ENSSSCG00000040706
ENSG00000113758
Drebrin 1
Low tissue specificity
Detected in all
DBNDD2
ENSSSCG00000033586
ENSG00000244274
Dysbindin domain-containing protein 2
Tissue enhanced
Detected in all
brain:
94.0
DBNL
ENSSSCG00000016721
ENSG00000136279
Drebrin like
Tissue enhanced
Detected in all
lens:
130.0
DBP
ENSSSCG00000003148
ENSG00000105516
D-box binding PAR bZIP transcription factor
Low tissue specificity
Detected in all
DBR1
ENSSSCG00000031098
ENSG00000138231
Debranching RNA lariats 1
Low tissue specificity
Detected in all
DBT
ENSSSCG00000006866
ENSG00000137992
Dihydrolipoamide branched chain transacylase E2
Low tissue specificity
Detected in all
DBX1
ENSSSCG00000013350
ENSG00000109851
Developing brain homeobox 1
Low tissue specificity
Detected in all
DCAF1
ENSSSCG00000011417
ENSG00000145041
DDB1 and CUL4 associated factor 1
Low tissue specificity
Detected in all
DCAF10
ENSSSCG00000005356
ENSG00000122741
DDB1 and CUL4 associated factor 10
Low tissue specificity
Detected in all
DCAF12
ENSSSCG00000024384
ENSG00000198876
DDB1 and CUL4 associated factor 12
Low tissue specificity
Detected in all
DCAF13
ENSSSCG00000006048
ENSG00000164934
DDB1 and CUL4 associated factor 13
Low tissue specificity
Detected in all
DCAF15
ENSSSCG00000013763
ENSG00000132017
DDB1 and CUL4 associated factor 15
Low tissue specificity
Detected in all
DCAF16
ENSSSCG00000040393
ENSG00000163257
DDB1 and CUL4 associated factor 16
Low tissue specificity
Detected in all
DCAF17
ENSSSCG00000015947
ENSG00000115827
DDB1 and CUL4 associated factor 17
Low tissue specificity
Detected in all
DCAF5
ENSSSCG00000039701
ENSG00000139990
DDB1 and CUL4 associated factor 5
Low tissue specificity
Detected in all
DCAF6
ENSSSCG00000006303
ENSG00000143164
DDB1 and CUL4 associated factor 6
Tissue enhanced
Detected in all
skeletal muscle:
99.3
DCAF7
ENSSSCG00000017294
ENSG00000136485
DDB1 and CUL4 associated factor 7
Low tissue specificity
Detected in all
DCAKD
ENSSSCG00000017340
ENSG00000172992
Dephospho-CoA kinase domain containing
Low tissue specificity
Detected in all
DCBLD1
ENSSSCG00000004254
ENSG00000164465
Discoidin, CUB and LCCL domain containing 1
Tissue enhanced
Detected in many
lens:
32.3
DCBLD2
ENSSSCG00000011977
ENSG00000057019
Discoidin, CUB and LCCL domain containing 2
Tissue enhanced
Detected in all
ovary:
62.9
DCDC2
ENSSSCG00000001085
ENSG00000146038
Doublecortin domain containing 2
Tissue enhanced
Detected in many
choroid plexus:
29.7
fallopian tube:
33.3
kidney:
30.9
DCDC2B
ENSSSCG00000022014
ENSG00000222046
Doublecortin domain containing 2B
Tissue enhanced
Detected in all
fallopian tube:
39.8
upper respiratory system:
35.3
DCHS1
ENSSSCG00000029189
ENSG00000166341
Dachsous cadherin-related 1
Tissue enhanced
Detected in many
cartilage:
47.4
DCK
ENSSSCG00000008942
ENSG00000156136
Deoxycytidine kinase
Tissue enriched
Detected in all
lymphoid tissue:
117.9
DCLK1
ENSSSCG00000033919
ENSG00000133083
Doublecortin like kinase 1
Tissue enhanced
Detected in many
brain:
69.5
pineal gland:
24.5
DCLK2
ENSSSCG00000009023
ENSG00000170390
Doublecortin like kinase 2
Tissue enhanced
Detected in all
brain:
39.9
lens:
55.9
DCLK3
ENSSSCG00000011241
ENSG00000163673
Doublecortin like kinase 3
Tissue enriched
Detected in many
lens:
53.8
DCLRE1A
ENSSSCG00000010644
ENSG00000198924
DNA cross-link repair 1A
Tissue enhanced
Detected in all
heart:
25.9
DCLRE1B
ENSSSCG00000006761
ENSG00000118655
DNA cross-link repair 1B
Low tissue specificity
Detected in all
DCLRE1C
ENSSSCG00000011049
ENSG00000152457
Protein artemis
Low tissue specificity
Detected in all
DCN
ENSSSCG00000000915
ENSG00000011465
Decorin precursor
Group enriched
Detected in many
cartilage:
321.1
cornea:
591.4
DCP1A
ENSSSCG00000022616
ENSG00000272886
MRNA-decapping enzyme 1A
Low tissue specificity
Detected in all
DCP2
ENSSSCG00000014204
ENSG00000172795
Decapping mRNA 2
Low tissue specificity
Detected in all
DCPS
ENSSSCG00000015231
ENSG00000110063
M7GpppX diphosphatase
Tissue enhanced
Detected in all
male glands:
74.1
DCST1
ENSSSCG00000035071
ENSG00000163357
DC-STAMP domain containing 1
Tissue enhanced
Detected in some
adipose tissue:
12.9
testis:
18.7
DCSTAMP
ENSSSCG00000006043
ENSG00000164935
Dendritic cell-specific transmembrane protein
Low tissue specificity
Detected in all
DCT
ENSSSCG00000009490
ENSG00000080166
L-dopachrome tautomerase
Tissue enhanced
Detected in all
male glands:
23.5
DCTD
ENSSSCG00000015775
ENSG00000129187
DCMP deaminase
Tissue enhanced
Detected in all
male glands:
56.5
DCTN1
ENSSSCG00000008274
ENSG00000204843
Dynactin subunit 1
Low tissue specificity
Detected in all
DCTN2
ENSSSCG00000000444
ENSG00000175203
Dynactin subunit 2
Low tissue specificity
Detected in all
DCTN3
ENSSSCG00000010972
ENSG00000137100
Dynactin subunit 3
Tissue enhanced
Detected in all
lens:
75.2
DCTN5
ENSSSCG00000040943
ENSG00000166847
Dynactin subunit 5
Low tissue specificity
Detected in all
DCTN6
ENSSSCG00000038895
ENSG00000104671
Dynactin subunit 6
Low tissue specificity
Detected in all
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