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Gene name
Human disease related genes
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UMAP gene cluster
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Keyword
Chromosome
1
2
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7
8
9
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11
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Lymphoid tissue
Male glands
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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TISSUE SPECIFIC PROTEOME
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15044 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
CEP162
ENSSSCG00000004289
ENSG00000135315
Centrosomal protein 162
Low tissue specificity
Detected in all
CEP164
ENSSSCG00000015080
ENSG00000110274
Centrosomal protein 164
Tissue enriched
Detected in all
testis:
56.2
CEP170
ENSSSCG00000030502
ENSG00000143702
Centrosomal protein 170
Low tissue specificity
Detected in all
CEP170B
ENSSSCG00000002558
ENSG00000099814
Centrosomal protein 170B
Tissue enhanced
Detected in many
epididymis:
69.4
CEP19
ENSSSCG00000021918
ENSG00000174007
Centrosomal protein 19
Low tissue specificity
Detected in all
CEP250
ENSSSCG00000021138
ENSG00000126001
Centrosomal protein 250
Low tissue specificity
Detected in all
CEP290
ENSSSCG00000000926
ENSG00000198707
Centrosomal protein 290
Low tissue specificity
Detected in all
CEP295
ENSSSCG00000014946
ENSG00000166004
Centrosomal protein 295
Low tissue specificity
Detected in all
CEP350
ENSSSCG00000015531
ENSG00000135837
Centrosomal protein 350
Low tissue specificity
Detected in all
CEP41
ENSSSCG00000016556
ENSG00000106477
Centrosomal protein 41
Low tissue specificity
Detected in all
CEP44
ENSSSCG00000032475
ENSG00000164118
Centrosomal protein 44
Tissue enhanced
Detected in all
testis:
27.8
CEP55
ENSSSCG00000010477
ENSG00000138180
Centrosomal protein 55
Tissue enhanced
Detected in many
testis:
34.9
CEP57L1
ENSSSCG00000004391
ENSG00000183137
Centrosomal protein 57 like 1
Tissue enhanced
Detected in all
testis:
20.6
CEP63
ENSSSCG00000011645
ENSG00000182923
Centrosomal protein 63
Tissue enhanced
Detected in all
testis:
80.9
CEP68
ENSSSCG00000008360
ENSG00000011523
Centrosomal protein 68
Low tissue specificity
Detected in all
CEP78
ENSSSCG00000005286
ENSG00000148019
Centrosomal protein 78
Low tissue specificity
Detected in all
CEP83
ENSSSCG00000024563
ENSG00000173588
Centrosomal protein 83
Low tissue specificity
Detected in all
CEP85
ENSSSCG00000026731
ENSG00000130695
Centrosomal protein 85
Tissue enhanced
Detected in all
heart:
36.1
skeletal muscle:
50.6
testis:
59.8
CEP85L
ENSSSCG00000004249
ENSG00000111860
Centrosomal protein 85 like
Low tissue specificity
Detected in all
CEP89
ENSSSCG00000025152
ENSG00000121289
Centrosomal protein 89
Low tissue specificity
Detected in all
CEP95
ENSSSCG00000028925
ENSG00000258890
Centrosomal protein 95
Low tissue specificity
Detected in all
CEP97
ENSSSCG00000011949
ENSG00000182504
Centrosomal protein 97
Low tissue specificity
Detected in all
CEPT1
ENSSSCG00000029918
ENSG00000134255
Choline/ethanolamine phosphotransferase 1
Tissue enhanced
Detected in all
male glands:
43.3
CERCAM
ENSSSCG00000005650
ENSG00000167123
Cerebral endothelial cell adhesion molecule
Tissue enhanced
Detected in many
cartilage:
38.6
synovial tissue:
37.8
CERK
ENSSSCG00000038763
ENSG00000100422
Ceramide kinase
Low tissue specificity
Detected in all
CERS2
ENSSSCG00000006644
ENSG00000143418
Ceramide synthase 2
Tissue enhanced
Detected in all
brain:
92.5
CERS4
ENSSSCG00000013595
ENSG00000090661
Ceramide synthase 4
Tissue enriched
Detected in many
epididymis:
111.9
CERS5
ENSSSCG00000024932
ENSG00000139624
Ceramide synthase 5
Low tissue specificity
Detected in all
CERS6
ENSSSCG00000032715
ENSG00000172292
Ceramide synthase 6
Tissue enhanced
Detected in many
lens:
30.5
CETN3
ENSSSCG00000014151
ENSG00000153140
Centrin 3
Low tissue specificity
Detected in all
CFAP126
ENSSSCG00000023957
ENSG00000188931
Cilia and flagella associated protein 126
Tissue enhanced
Detected in all
choroid plexus:
63.1
fallopian tube:
75.7
testis:
53.2
upper respiratory system:
71.6
CFAP157
ENSSSCG00000005618
ENSG00000160401
Cilia and flagella associated protein 157
Tissue enhanced
Detected in all
lung:
24.6
upper respiratory system:
25.9
CFAP161
ENSSSCG00000001786
ENSG00000156206
Cilia- and flagella-associated protein 161
Tissue enhanced
Detected in some
brain:
11.3
choroid plexus:
17.1
fallopian tube:
26.6
lung:
11.6
upper respiratory system:
19.7
CFAP20
ENSSSCG00000002805
ENSG00000070761
Cilia- and flagella-associated protein 20
Tissue enriched
Detected in all
lens:
56.2
CFAP221
ENSSSCG00000015741
ENSG00000163075
Cilia and flagella associated protein 221
Tissue enhanced
Detected in all
fallopian tube:
23.3
testis:
27.9
CFAP36
ENSSSCG00000008400
ENSG00000163001
Cilia- and flagella-associated protein 36
Low tissue specificity
Detected in all
CFAP45
ENSSSCG00000006394
ENSG00000213085
Cilia and flagella associated protein 45
Low tissue specificity
Detected in all
CFAP58
ENSSSCG00000010614
ENSG00000120051
Cilia and flagella associated protein 58
Tissue enhanced
Detected in many
choroid plexus:
23.8
fallopian tube:
22.9
testis:
19.2
CFAP77
ENSSSCG00000005727
ENSG00000188523
Cilia and flagella associated protein 77
Tissue enhanced
Detected in all
fallopian tube:
26.7
upper respiratory system:
19.9
CFAP97
ENSSSCG00000015791
ENSG00000164323
Cilia and flagella associated protein 97
Tissue enriched
Detected in all
testis:
129.9
CFAP99
ENSSSCG00000034633
ENSG00000206113
Cilia and flagella associated protein 99
Low tissue specificity
Detected in all
CFD
ENSSSCG00000013418
ENSG00000197766
Complement factor D
Tissue enhanced
Detected in many
gallbladder:
125.8
small intestine:
98.3
stomach:
122.6
CFL1
ENSSSCG00000012974
Cofilin-1
Low tissue specificity
Detected in all
CFL2
ENSSSCG00000001959
ENSG00000165410
Cofilin-2
Tissue enhanced
Detected in all
skeletal muscle:
60.3
smooth muscle:
74.5
CFLAR
ENSSSCG00000016101
ENSG00000003402
CASP8 and FADD-like apoptosis regulator
Low tissue specificity
Detected in all
CFP
ENSSSCG00000012278
ENSG00000126759
Complement factor properdin
Tissue enhanced
Detected in many
lymphoid tissue:
22.0
small intestine:
36.0
stomach:
48.2
CGAS
ENSSSCG00000021383
ENSG00000164430
Cyclic GMP-AMP synthase
Tissue enhanced
Detected in all
lymphoid tissue:
24.0
CGGBP1
ENSSSCG00000032182
ENSG00000163320
CGG triplet repeat binding protein 1
Low tissue specificity
Detected in all
CGN
ENSSSCG00000006621
ENSG00000143375
Cingulin
Tissue enhanced
Detected in many
stomach:
50.2
CGNL1
ENSSSCG00000035038
ENSG00000128849
Cingulin like 1
Tissue enhanced
Detected in many
kidney:
62.8
thyroid gland:
72.5
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