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Keyword
Chromosome
1
2
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6
7
8
9
10
11
12
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14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Lymphoid tissue
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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16894 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
KCNG1
ENSSSCG00000007476
ENSG00000026559
Potassium voltage-gated channel subfamily G member 1
Tissue enhanced
Detected in all
brain:
19.5
cervix:
16.8
endometrium:
20.6
KCNG3
ENSSSCG00000008465
ENSG00000171126
Potassium voltage-gated channel modifier subfamily G member 3
Tissue enhanced
Detected in many
cornea:
10.3
epididymis:
18.7
male glands:
20.1
KCNH2
ENSSSCG00000016448
ENSG00000055118
Potassium voltage-gated channel subfamily H member 2
Tissue enhanced
Detected in many
heart:
30.8
KCNH3
ENSSSCG00000000203
ENSG00000135519
Potassium voltage-gated channel subfamily H member 3
Tissue enriched
Detected in some
brain:
29.4
KCNH4
ENSSSCG00000017411
ENSG00000089558
Potassium voltage-gated channel subfamily H member 4
Low tissue specificity
Detected in all
KCNH8
ENSSSCG00000011204
ENSG00000183960
Potassium voltage-gated channel subfamily H member 8
Tissue enhanced
Detected in some
brain:
9.7
choroid plexus:
8.2
pituitary gland:
18.3
upper respiratory system:
7.2
KCNIP1
ENSSSCG00000017003
ENSG00000182132
Kv channel-interacting protein 1
Tissue enhanced
Detected in all
brain:
38.8
KCNIP2
ENSSSCG00000010570
ENSG00000120049
Potassium voltage-gated channel interacting protein 2
Group enriched
Detected in many
brain:
34.9
heart:
89.5
KCNIP3
ENSSSCG00000008119
ENSG00000115041
Potassium voltage-gated channel interacting protein 3
Tissue enhanced
Detected in all
brain:
31.1
KCNJ13
ENSSSCG00000025038
ENSG00000115474
Potassium voltage-gated channel subfamily J member 13
Tissue enriched
Detected in many
choroid plexus:
250.6
KCNJ15
ENSSSCG00000012066
ENSG00000157551
Potassium voltage-gated channel subfamily J member 15
Tissue enriched
Detected in many
kidney:
125.9
KCNJ16
ENSSSCG00000034358
ENSG00000153822
Potassium voltage-gated channel subfamily J member 16
Tissue enhanced
Detected in many
brain:
17.8
kidney:
59.2
KCNJ18
ENSSSCG00000034773
ENSG00000260458
Potassium voltage-gated channel subfamily J member 18
Group enriched
Detected in many
brain:
21.1
lens:
77.9
skeletal muscle:
30.3
KCNJ2
ENSSSCG00000039947
ENSG00000123700
Inward rectifier potassium channel 2
Tissue enhanced
Detected in many
dura mater:
39.5
heart:
56.6
skeletal muscle:
29.9
KCNJ8
ENSSSCG00000000573
ENSG00000121361
Potassium voltage-gated channel subfamily J member 8
Tissue enhanced
Detected in many
heart:
30.4
KCNK1
ENSSSCG00000010163
ENSG00000135750
Potassium two pore domain channel subfamily K member 1
Tissue enhanced
Detected in many
brain:
63.0
epididymis:
45.4
male glands:
31.4
KCNK10
ENSSSCG00000002423
ENSG00000100433
Potassium two pore domain channel subfamily K member 10
Tissue enhanced
Detected in many
brain:
24.4
cornea:
12.3
stomach:
23.1
KCNK16
ENSSSCG00000037484
ENSG00000095981
Potassium two pore domain channel subfamily K member 16
Low tissue specificity
Detected in all
KCNK18
ENSSSCG00000024337
ENSG00000186795
Potassium two pore domain channel subfamily K member 18
Tissue enhanced
Detected in many
gallbladder:
5.3
KCNK2
ENSSSCG00000023451
ENSG00000082482
Potassium channel subfamily K member 2
Tissue enhanced
Detected in many
adrenal gland:
25.7
brain:
27.2
pituitary gland:
14.7
KCNK5
ENSSSCG00000025423
ENSG00000164626
Potassium two pore domain channel subfamily K member 5
Tissue enhanced
Detected in many
cartilage:
29.6
kidney:
24.7
KCNK6
ENSSSCG00000038902
ENSG00000099337
Potassium two pore domain channel subfamily K member 6
Tissue enhanced
Detected in all
male glands:
45.5
KCNK7
ENSSSCG00000012986
ENSG00000173338
Potassium two pore domain channel subfamily K member 7
Tissue enhanced
Detected in many
cornea:
18.5
mouth:
17.7
skin:
34.2
KCNMA1
ENSSSCG00000010325
ENSG00000156113
Calcium-activated potassium channel subunit alpha-1
Tissue enhanced
Detected in many
cervix:
87.5
pineal gland:
73.5
smooth muscle:
70.9
KCNMB1
ENSSSCG00000017005
ENSG00000145936
Potassium calcium-activated channel subfamily M regulatory beta subunit 1
Tissue enhanced
Detected in many
ductus deferens:
58.9
smooth muscle:
109.2
KCNMB3
ENSSSCG00000029240
ENSG00000171121
Potassium calcium-activated channel subfamily M regulatory beta subunit 3
Tissue enhanced
Detected in many
lymphoid tissue:
16.0
KCNMB4
ENSSSCG00000031173
ENSG00000135643
Potassium calcium-activated channel subfamily M regulatory beta subunit 4
Group enriched
Detected in many
brain:
18.8
choroid plexus:
30.4
vagus nerve:
32.4
KCNN3
ENSSSCG00000006542
ENSG00000143603
Small conductance calcium-activated potassium channel protein 3
Tissue enhanced
Detected in many
penis:
52.7
smooth muscle:
52.1
KCNN4
ENSSSCG00000003069
ENSG00000104783
Intermediate conductance calcium-activated potassium channel protein 4
Tissue enhanced
Detected in some
esophagus:
17.7
male glands:
41.4
salivary gland:
35.3
upper respiratory system:
24.5
KCNQ1
ENSSSCG00000039556
ENSG00000053918
Potassium voltage-gated channel subfamily Q member 1
Tissue enhanced
Detected in many
adrenal gland:
44.5
kidney:
34.7
male glands:
35.3
stomach:
54.3
KCNQ4
ENSSSCG00000003975
ENSG00000117013
Potassium voltage-gated channel subfamily Q member 4
Tissue enhanced
Detected in many
skeletal muscle:
24.0
KCNQ5
ENSSSCG00000004281
ENSG00000185760
Potassium voltage-gated channel subfamily Q member 5
Group enriched
Detected in many
brain:
24.8
cartilage:
65.1
KCNRG
ENSSSCG00000009388
ENSG00000198553
Potassium channel regulator
Tissue enhanced
Detected in many
fallopian tube:
25.9
upper respiratory system:
24.7
KCNS1
ENSSSCG00000007385
ENSG00000124134
Potassium voltage-gated channel modifier subfamily S member 1
Tissue enhanced
Detected in many
epididymis:
13.1
KCNS2
ENSSSCG00000031917
ENSG00000156486
Potassium voltage-gated channel modifier subfamily S member 2
Tissue enhanced
Detected in many
brain:
16.5
testis:
7.6
KCNS3
ENSSSCG00000031905
ENSG00000170745
Potassium voltage-gated channel subfamily S member 3
Tissue enhanced
Detected in many
brain:
15.7
gallbladder:
17.2
urinary bladder:
14.7
KCNT1
ENSSSCG00000005762
ENSG00000107147
Potassium sodium-activated channel subfamily T member 1
Tissue enriched
Detected in many
brain:
40.5
KCP
ENSSSCG00000016574
ENSG00000135253
Kielin/chordin-like protein
Tissue enhanced
Detected in many
epididymis:
63.0
kidney:
41.0
lymphoid tissue:
27.9
KCTD10
ENSSSCG00000009934
ENSG00000110906
Potassium channel tetramerization domain containing 10
Low tissue specificity
Detected in all
KCTD12
ENSSSCG00000009468
ENSG00000178695
Potassium channel tetramerization domain containing 12
Tissue enhanced
Detected in many
adrenal gland:
93.4
KCTD13
ENSSSCG00000040888
ENSG00000174943
Potassium channel tetramerization domain containing 13
Tissue enhanced
Detected in all
brain:
23.3
KCTD15
ENSSSCG00000033695
ENSG00000153885
Potassium channel tetramerization domain containing 15
Tissue enhanced
Detected in all
smooth muscle:
61.3
KCTD16
ENSSSCG00000032826
ENSG00000183775
Potassium channel tetramerization domain containing 16
Tissue enhanced
Detected in many
brain:
24.2
choroid plexus:
19.7
male glands:
26.2
salivary gland:
16.0
KCTD17
ENSSSCG00000000135
ENSG00000100379
Potassium channel tetramerization domain containing 17
Tissue enhanced
Detected in many
brain:
47.4
stomach:
34.6
KCTD2
ENSSSCG00000031958
ENSG00000180901
Potassium channel tetramerization domain containing 2
Low tissue specificity
Detected in all
KCTD20
ENSSSCG00000001562
ENSG00000112078
Potassium channel tetramerization domain containing 20
Low tissue specificity
Detected in all
KCTD21
ENSSSCG00000033506
ENSG00000188997
Potassium channel tetramerization domain containing 21
Tissue enhanced
Detected in many
brain:
21.5
lens:
17.9
KCTD4
ENSSSCG00000022868
ENSG00000180332
Potassium channel tetramerization domain containing 4
Tissue enhanced
Detected in all
brain:
22.8
vagus nerve:
19.1
KCTD5
ENSSSCG00000008058
ENSG00000167977
Potassium channel tetramerization domain containing 5
Low tissue specificity
Detected in all
KCTD6
ENSSSCG00000022131
ENSG00000168301
Potassium channel tetramerization domain containing 6
Low tissue specificity
Detected in all
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