We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
22342 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 447 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
CYHR1
ENSSSCG00000027076
ENSG00000187954
Cysteine and histidine rich 1
Low tissue specificity
Detected in all
CYLC1
ENSSSCG00000012455
ENSG00000183035
Cylicin 1
Tissue enriched
Detected in single
testis:
47.0
CYLD
ENSSSCG00000040286
ENSG00000083799
CYLD lysine 63 deubiquitinase
Low tissue specificity
Detected in all
CYP11A1
ENSSSCG00000025273
ENSG00000140459
Cholesterol side-chain cleavage enzyme, mitochondrial
Group enriched
Detected in some
adrenal gland:
230.0
ovary:
287.1
testis:
79.2
CYP17A1
ENSSSCG00000010591
ENSG00000148795
Steroid 17-alpha-hydroxylase/17,20 lyase
Group enriched
Detected in some
adrenal gland:
453.1
testis:
241.1
CYP19A1
ENSSSCG00000030168
ENSG00000137869
Aromatase 1
Tissue enriched
Detected in all
testis:
249.1
CYP1A1
ENSSSCG00000001906
ENSG00000140465
Cytochrome P450 1A1
Tissue enriched
Detected in many
liver:
54.7
CYP1A2
ENSSSCG00000001901
ENSG00000140505
Cytochrome P450 1A2
Tissue enriched
Detected in some
liver:
135.1
CYP1B1
ENSSSCG00000033844
ENSG00000138061
Cytochrome P450 family 1 subfamily B member 1
Tissue enhanced
Detected in many
dura mater:
50.8
ovary:
77.7
CYP20A1
ENSSSCG00000016118
ENSG00000119004
Cytochrome P450, family 20, subfamily A, polypeptide 1
Low tissue specificity
Detected in all
CYP21A2
ENSSSCG00000001428
ENSG00000231852
Steroid 21-hydroxylase
Tissue enriched
Detected in many
adrenal gland:
367.3
CYP24A1
ENSSSCG00000007486
ENSG00000019186
1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial
Tissue enhanced
Detected in all
upper respiratory system:
29.3
CYP26A1
ENSSSCG00000010475
ENSG00000095596
Cytochrome P450, family 26, subfamily A, polypeptide 1
Tissue enhanced
Detected in some
brain:
10.6
cornea:
10.6
endometrium:
15.5
retina:
6.7
CYP26B1
ENSSSCG00000008311
ENSG00000003137
Cytochrome P450 family 26 subfamily B member 1
Tissue enhanced
Detected in many
cartilage:
68.0
penis:
20.0
skin:
17.6
CYP26C1
ENSSSCG00000010474
ENSG00000187553
Cytochrome P450 family 26 subfamily C member 1
Low tissue specificity
Detected in many
CYP27A1
ENSSSCG00000016199
ENSG00000135929
Sterol 26-hydroxylase, mitochondrial
Tissue enriched
Detected in many
liver:
139.3
CYP27B1
ENSSSCG00000028637
ENSG00000111012
25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial
Low tissue specificity
Detected in all
CYP27C1
ENSSSCG00000031497
ENSG00000186684
Cytochrome P450 family 27 subfamily C member 1
Tissue enhanced
Detected in many
brain:
6.3
CYP2A19
ENSSSCG00000002993
ENSG00000197838,ENSG00000255974
Cytochrome P450 2A19
Group enriched
Detected in many
kidney:
186.8
liver:
187.0
upper respiratory system:
177.8
CYP2B22
ENSSSCG00000003006
ENSG00000197408
Cytochrome P450 2B22 precursor
Tissue enhanced
Detected in many
esophagus:
30.3
lung:
33.2
upper respiratory system:
92.8
CYP2C42
ENSSSCG00000024537
Cytochrome P450 2C42 precursor
Tissue enhanced
Detected in many
liver:
37.2
small intestine:
46.9
stomach:
40.2
CYP2C49
ENSSSCG00000010488
Cytochrome P450 2C49 precursor
Tissue enriched
Detected in some
liver:
115.3
CYP2D25
ENSSSCG00000000046
ENSG00000100197
Vitamin D(3) 25-hydroxylase
Group enriched
Detected in some
kidney:
72.5
liver:
215.7
CYP2E1
ENSSSCG00000010780
ENSG00000130649
Cytochrome P450 2E1
Tissue enriched
Detected in some
liver:
200.9
CYP2F1
ENSSSCG00000002994
ENSG00000197446
Cytochrome P450 family 2 subfamily F member 1
Tissue enriched
Detected in many
upper respiratory system:
68.0
CYP2J34
ENSSSCG00000003825
ENSG00000134716
Cytochrome P450, family 2, subfamily J, polypeptide 34
Tissue enhanced
Detected in all
brain:
40.9
lens:
53.1
male glands:
34.2
CYP2R1
ENSSSCG00000013389
ENSG00000186104
Cytochrome P450 family 2 subfamily R member 1
Low tissue specificity
Detected in all
CYP2S1
ENSSSCG00000032803
ENSG00000167600
Cytochrome P450 family 2 subfamily S member 1
Tissue enhanced
Detected in many
stomach:
41.0
CYP2U1
ENSSSCG00000009151
ENSG00000155016
Cytochrome P450 family 2 subfamily U member 1
Low tissue specificity
Detected in all
CYP2W1
ENSSSCG00000007549
ENSG00000073067
Cytochrome P450 family 2 subfamily W member 1
Tissue enhanced
Detected in many
stomach:
7.7
urinary bladder:
9.1
CYP39A1
ENSSSCG00000001718
ENSG00000146233
Sus scrofa 24-hydroxycholesterol 7-alpha-hydroxylase-like (LOC100738724), mRNA.
Low tissue specificity
Detected in all
CYP3A39
ENSSSCG00000023320
Sus scrofa cytochrome P450 3A39 (CYP3A39), mRNA.
Tissue enriched
Detected in many
liver:
376.2
CYP46A1
ENSSSCG00000002510
ENSG00000036530
Cytochrome P450 family 46 subfamily A member 1
Tissue enriched
Detected in some
brain:
54.2
CYP4A24
ENSSSCG00000003891
Taurochenodeoxycholic 6 alpha-hydroxylase
Group enriched
Detected in some
kidney:
154.6
liver:
127.4
CYP4B1
ENSSSCG00000003894
ENSG00000142973
Cytochrome P450 family 4 subfamily B member 1
Tissue enhanced
Detected in many
adipose tissue:
47.5
lung:
64.9
salivary gland:
50.4
upper respiratory system:
47.5
CYP4F22
ENSSSCG00000023607
ENSG00000171954
Cytochrome P450 family 4 subfamily F member 22
Group enriched
Detected in some
mouth:
19.6
skin:
21.9
CYP4V2
ENSSSCG00000032687
ENSG00000145476
Cytochrome P450 family 4 subfamily V member 2
Tissue enhanced
Detected in all
liver:
38.0
CYP51A1
ENSSSCG00000015311
ENSG00000001630
Lanosterol 14-alpha demethylase
Low tissue specificity
Detected in all
CYP7A1
ENSSSCG00000006238
ENSG00000167910
Cholesterol 7-alpha-monooxygenase
Tissue enriched
Detected in many
liver:
82.5
CYP7B1
ENSSSCG00000022092
ENSG00000172817
Cytochrome P450 family 7 subfamily B member 1
Tissue enhanced
Detected in all
liver:
68.1
CYP8B1
ENSSSCG00000034388
ENSG00000180432
5-beta-cholestane-3-alpha,7-alpha-diol 12-alpha-hydroxylase
Tissue enriched
Detected in some
epididymis:
58.8
CYR61
ENSSSCG00000006940
ENSG00000142871
Cysteine rich angiogenic inducer 61
Tissue enhanced
Detected in many
cartilage:
155.3
CYS1
ENSSSCG00000040267
ENSG00000205795
Cystin 1
Low tissue specificity
Detected in all
CYSLTR1
ENSSSCG00000039203
ENSG00000173198
Cysteinyl leukotriene receptor 1
Tissue enhanced
Detected in many
lymphoid tissue:
17.1
CYSLTR2
ENSSSCG00000009399
ENSG00000152207
Cysteinyl leukotriene receptor 2
Low tissue specificity
Detected in all
CYSRT1
ENSSSCG00000005857
ENSG00000197191
Cysteine rich tail 1
Tissue enriched
Detected in many
mouth:
59.0
CYTB
ENSSSCG00000018094
ENSG00000198727
Cytochrome b (mitochondrion)
Tissue enhanced
Detected in all
heart:
1273.8
CYTH1
ENSSSCG00000017167
ENSG00000108669
Cytohesin 1
Low tissue specificity
Detected in all
CYTH3
ENSSSCG00000034768
ENSG00000008256
Cytohesin 3
Low tissue specificity
Detected in all
CYTH4
ENSSSCG00000000130
ENSG00000100055
Cytohesin-4
Tissue enhanced
Detected in many
lymphoid tissue:
30.0
stomach:
28.7
« prev
| Page
of 447 |
next »
MENU
