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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Gene name
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Cancers
Cardiovascular diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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658 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
na
ENSSSCG00000031288
ENSG00000102805
Low tissue specificity
Detected in all
na
ENSSSCG00000031420
ENSG00000130489,ENSG00000284194
SCO cytochrome oxidase deficient homolog 2 precursor
Low tissue specificity
Detected in all
na
ENSSSCG00000031450
ENSG00000103150
Low tissue specificity
Detected in all
na
ENSSSCG00000032556
ENSG00000149925,ENSG00000285043
Group enriched
Detected in all
lens:
1739.5
skeletal muscle:
509.9
na
ENSSSCG00000033350
ENSG00000114200
Tissue enriched
Detected in many
salivary gland:
111.4
na
ENSSSCG00000033787
ENSG00000100033
Tissue enhanced
Detected in many
brain:
25.6
choroid plexus:
27.8
na
ENSSSCG00000034614
ENSG00000163933
Low tissue specificity
Detected in all
na
ENSSSCG00000034689
ENSG00000277494
Glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 precursor
Tissue enhanced
Detected in many
adipose tissue:
53.3
bone marrow:
22.4
na
ENSSSCG00000034790
ENSG00000163170
Low tissue specificity
Detected in many
na
ENSSSCG00000034896
ENSG00000165704
Hypoxanthine-guanine phosphoribosyltransferase
Tissue enhanced
Detected in all
brain:
35.0
liver:
42.1
na
ENSSSCG00000035103
ENSG00000108474
Low tissue specificity
Detected in all
na
ENSSSCG00000035429
ENSG00000168509
Group enriched
Detected in all
liver:
31.0
skeletal muscle:
59.7
na
ENSSSCG00000035538
ENSG00000156467
Ubiquinol-cytochrome c reductase binding protein
Tissue enhanced
Detected in all
skeletal muscle:
47.1
na
ENSSSCG00000035606
ENSG00000117450
Tissue enhanced
Detected in some
brain:
1.6
breast:
1.7
male glands:
1.7
pituitary gland:
1.9
na
ENSSSCG00000036579
ENSG00000108561
Group enriched
Detected in some
heart:
3.4
skeletal muscle:
4.9
na
ENSSSCG00000036603
ENSG00000188603,ENSG00000261832
Battenin
Low tissue specificity
Detected in all
na
ENSSSCG00000037201
ENSG00000115204
Low tissue specificity
Detected in all
na
ENSSSCG00000038426
ENSG00000036473
Tissue enhanced
Detected in all
liver:
39.4
na
ENSSSCG00000038960
ENSG00000165102
Low tissue specificity
Detected in all
na
ENSSSCG00000039305
ENSG00000100348
Low tissue specificity
Detected in all
na
ENSSSCG00000039618
ENSG00000203667
Low tissue specificity
Detected in all
na
ENSSSCG00000040157
ENSG00000065000
Low tissue specificity
Detected in all
na
ENSSSCG00000040416
ENSG00000174483,ENSG00000256349
Low tissue specificity
Detected in all
na
ENSSSCG00000040779
ENSG00000160200,ENSG00000274276
Group enriched
Detected in many
epididymis:
23.8
liver:
88.1
NADK2
ENSSSCG00000016836
ENSG00000152620
NAD kinase 2, mitochondrial
Tissue enhanced
Detected in all
liver:
61.6
NAGA
ENSSSCG00000000050
ENSG00000198951
Alpha-N-acetylgalactosaminidase precursor
Low tissue specificity
Detected in all
NAGLU
ENSSSCG00000035147
ENSG00000108784
N-acetyl-alpha-glucosaminidase
Low tissue specificity
Detected in all
NAGS
ENSSSCG00000024179
ENSG00000161653
N-acetylglutamate synthase, mitochondrial
Tissue enriched
Detected in some
liver:
60.8
NARS2
ENSSSCG00000014893
ENSG00000137513
Asparaginyl-tRNA synthetase 2, mitochondrial
Low tissue specificity
Detected in all
NBAS
ENSSSCG00000008621
ENSG00000151779
Neuroblastoma amplified sequence
Low tissue specificity
Detected in all
ND1
ENSSSCG00000018065
ENSG00000198888
NADH dehydrogenase subunit 1 (mitochondrion)
Tissue enhanced
Detected in all
heart:
1382.7
ND2
ENSSSCG00000018069
ENSG00000198763
NADH-ubiquinone oxidoreductase chain 2
Tissue enhanced
Detected in all
heart:
888.1
ND3
ENSSSCG00000018084
ENSG00000198840
NADH-ubiquinone oxidoreductase chain 3
Tissue enhanced
Detected in all
heart:
1339.5
ND4
ENSSSCG00000018087
ENSG00000198886
NADH-ubiquinone oxidoreductase chain 4
Tissue enhanced
Detected in all
heart:
1220.5
ND4L
ENSSSCG00000018086
ENSG00000212907
NADH-ubiquinone oxidoreductase chain 4L
Tissue enhanced
Detected in all
heart:
1287.2
ND5
ENSSSCG00000018091
ENSG00000198786
NADH-ubiquinone oxidoreductase chain 5
Tissue enhanced
Detected in all
heart:
1058.0
ND6
ENSSSCG00000018092
ENSG00000198695
NADH-ubiquinone oxidoreductase chain 6
Tissue enhanced
Detected in all
heart:
887.1
NDUFA10
ENSSSCG00000016349
ENSG00000130414
NADH:ubiquinone oxidoreductase subunit A10
Low tissue specificity
Detected in all
NDUFA13
ENSSSCG00000013936
ENSG00000186010
NADH dehydrogenase
Tissue enhanced
Detected in all
testis:
78.2
NDUFAF1
ENSSSCG00000004748
ENSG00000137806
NADH:ubiquinone oxidoreductase complex assembly factor 1
Low tissue specificity
Detected in all
NDUFAF2
ENSSSCG00000027763
ENSG00000164182
NADH:ubiquinone oxidoreductase complex assembly factor 2
Low tissue specificity
Detected in all
NDUFAF3
ENSSSCG00000011371
ENSG00000178057
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFAF5
ENSSSCG00000007076
ENSG00000101247
NADH:ubiquinone oxidoreductase complex assembly factor 5
Tissue enhanced
Detected in all
testis:
22.7
NDUFAF6
ENSSSCG00000006093
ENSG00000156170
NADH:ubiquinone oxidoreductase complex assembly factor 6
Low tissue specificity
Detected in all
NDUFB9
ENSSSCG00000005976
ENSG00000147684
NADH:ubiquinone oxidoreductase subunit B9
Tissue enhanced
Detected in all
skeletal muscle:
173.3
NDUFS1
ENSSSCG00000016127
ENSG00000023228
NADH:ubiquinone oxidoreductase core subunit S1
Tissue enhanced
Detected in all
skeletal muscle:
68.8
NDUFS2
ENSSSCG00000006358
ENSG00000158864
NADH:ubiquinone oxidoreductase core subunit S2
Tissue enhanced
Detected in all
skeletal muscle:
66.4
NDUFS3
ENSSSCG00000032081
ENSG00000213619
NADH dehydrogenase
Low tissue specificity
Detected in all
NDUFS4
ENSSSCG00000016893
ENSG00000164258
NADH:ubiquinone oxidoreductase subunit S4
Low tissue specificity
Detected in all
NDUFS6
ENSSSCG00000017114
ENSG00000145494
NADH:ubiquinone oxidoreductase subunit S6
Tissue enhanced
Detected in all
heart:
63.1
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