We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies.
More information
.
Don't show this again.
Search
Fields »
AND
NOT
Field
All
Gene name
Human disease related genes
Uniprot keyword
Chromosome
External id
Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
Sort by
Term
Gene name
Class
Cancers
Cardiovascular diseases
Congenital disorders of metabolism
Congenital malformations
Digestive system diseases
Endocrine and metabolic diseases
Immune system diseases
Musculoskeletal diseases
Nervous system diseases
Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
Skin diseases
Urinary system diseases
Subclass
Class
Biological process
Molecular function
Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
MT
Unmapped
X
Y
External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
Add
Cancel
MENU
HELP
THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
BIOMEDICAL RESEARCH
DICTIONARY
THE PROJECT
INTRODUCTION
CONTACT
TECHNICAL DATA
ASSAYS & ANNOTATION
DISCLAIMER
DOWNLOADABLE DATA
HELP & FAQ
LICENCE & CITATION
PRIVACY STATEMENT
RELEASE HISTORY
658 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
Set Default Columns
Apply
1.
Select data columns:
Gene
Expand
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
Select format to download:
Download TSV
Copy TSV link
Download JSON
Copy JSON link
Show / hide columns
Download:
TSV
|
JSON
|
Custom TSV/JSON
« prev
| Page
of 14 |
next »
Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
SUMF1
ENSSSCG00000011532
ENSG00000144455
Sulfatase-modifying factor 1 precursor
Tissue enhanced
Detected in all
male glands:
63.6
SUOX
ENSSSCG00000000376
ENSG00000139531
Sulfite oxidase, mitochondrial
Low tissue specificity
Detected in all
SURF1
ENSSSCG00000035727
ENSG00000148290
SURF1, cytochrome c oxidase assembly factor
Low tissue specificity
Detected in all
TACO1
ENSSSCG00000036944
ENSG00000136463
Translational activator of cytochrome c oxidase 1
Low tissue specificity
Detected in all
TALDO1
ENSSSCG00000012847
ENSG00000177156
Transaldolase
Low tissue specificity
Detected in all
TARS2
ENSSSCG00000026395
ENSG00000143374
Threonyl-tRNA synthetase 2, mitochondrial
Low tissue specificity
Detected in all
TAT
ENSSSCG00000002736
ENSG00000198650
Tyrosine aminotransferase
Tissue enriched
Detected in some
liver:
149.8
TAZ
ENSSSCG00000039655
ENSG00000102125
Tafazzin
Low tissue specificity
Detected in all
TCN2
ENSSSCG00000010011
ENSG00000185339
Transcobalamin-2 precursor
Low tissue specificity
Detected in all
TFAM
ENSSSCG00000040185
ENSG00000108064
Transcription factor A, mitochondrial
Low tissue specificity
Detected in all
TFR2
ENSSSCG00000007671
ENSG00000106327
Transferrin receptor 2
Tissue enriched
Detected in some
liver:
84.5
TIMM50
ENSSSCG00000026612
ENSG00000105197
Translocase of inner mitochondrial membrane 50
Low tissue specificity
Detected in all
TIMM8A
ENSSSCG00000012494
ENSG00000126953
Translocase of inner mitochondrial membrane 8A
Low tissue specificity
Detected in all
TIMMDC1
ENSSSCG00000037639
ENSG00000113845
Translocase of inner mitochondrial membrane domain containing 1
Low tissue specificity
Detected in all
TK2
ENSSSCG00000038053
ENSG00000166548
Thymidine kinase 2, mitochondrial
Low tissue specificity
Detected in all
TKT
ENSSSCG00000021408
ENSG00000163931
Transketolase
Tissue enhanced
Detected in all
cornea:
113.9
TMEM126B
ENSSSCG00000014905
ENSG00000171204
Complex I assembly factor TMEM126B, mitochondrial
Low tissue specificity
Detected in all
TMEM165
ENSSSCG00000032234
ENSG00000134851
Transmembrane protein 165
Low tissue specificity
Detected in all
TMEM199
ENSSSCG00000040883
ENSG00000244045
Transmembrane protein 199
Low tissue specificity
Detected in all
TMEM70
ENSSSCG00000021628
ENSG00000175606
Transmembrane protein 70
Low tissue specificity
Detected in all
TMPRSS15
ENSSSCG00000012019
ENSG00000154646
Enteropeptidase proprotein
Tissue enriched
Detected in some
small intestine:
51.5
TPK1
ENSSSCG00000015462
ENSG00000196511
Thiamin pyrophosphokinase 1
Low tissue specificity
Detected in all
TPMT
ENSSSCG00000001073
ENSG00000137364
Thiopurine S-methyltransferase
Tissue enhanced
Detected in many
pineal gland:
22.5
TPP1
ENSSSCG00000023080
ENSG00000166340
Tripeptidyl peptidase 1
Low tissue specificity
Detected in all
TREH
ENSSSCG00000028204
ENSG00000118094
Trehalase
Group enriched
Detected in many
gallbladder:
26.4
kidney:
11.6
small intestine:
20.8
TREM2
ENSSSCG00000039270
ENSG00000095970
Triggering receptor expressed on myeloid cells 2 precursor
Tissue enhanced
Detected in all
brain:
20.4
TRIM32
ENSSSCG00000005501
ENSG00000119401
Tripartite motif containing 32
Tissue enhanced
Detected in all
brain:
30.2
TRMT10C
ENSSSCG00000011956
ENSG00000174173
TRNA methyltransferase 10C, mitochondrial RNase P subunit
Low tissue specificity
Detected in all
TRMT5
ENSSSCG00000024529
ENSG00000126814
TRNA methyltransferase 5
Low tissue specificity
Detected in all
TRMU
ENSSSCG00000000007
ENSG00000100416
TRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Low tissue specificity
Detected in all
TRPM6
ENSSSCG00000005269
ENSG00000119121
Transient receptor potential cation channel subfamily M member 6
Tissue enhanced
Detected in many
kidney:
30.9
TSFM
ENSSSCG00000037767
ENSG00000123297
Ts translation elongation factor, mitochondrial
Low tissue specificity
Detected in all
TTC19
ENSSSCG00000023747
ENSG00000011295
Tetratricopeptide repeat domain 19
Low tissue specificity
Detected in all
TTC8
ENSSSCG00000002428
ENSG00000165533
Tetratricopeptide repeat domain 8
Tissue enhanced
Detected in many
pituitary gland:
31.1
TUBB4A
ENSSSCG00000013545
ENSG00000104833
Tubulin beta 4A class IVa
Tissue enriched
Detected in some
brain:
146.9
TUFM
ENSSSCG00000007803
ENSG00000178952
Tu translation elongation factor, mitochondrial
Low tissue specificity
Detected in all
TWNK
ENSSSCG00000030428
ENSG00000107815
Twinkle mtDNA helicase
Low tissue specificity
Detected in all
TYR
ENSSSCG00000026409
ENSG00000077498
Tyrosinase precursor
Tissue enhanced
Detected in many
kidney:
31.6
testis:
9.3
TYROBP
ENSSSCG00000002919
ENSG00000011600
TYRO protein tyrosine kinase-binding protein
Tissue enhanced
Detected in many
lymphoid tissue:
70.7
synovial tissue:
61.1
TYRP1
ENSSSCG00000005193
ENSG00000107165
5,6-dihydroxyindole-2-carboxylic acid oxidase precursor
Low tissue specificity
Detected in all
UMPS
ENSSSCG00000011864
ENSG00000114491
Uridine monophosphate synthetase
Low tissue specificity
Detected in all
UPB1
ENSSSCG00000010060
ENSG00000100024
Beta-ureidopropionase 1
Group enriched
Detected in all
kidney:
78.6
liver:
120.3
UQCC2
ENSSSCG00000030668
ENSG00000137288
Uncharacterized protein LOC100153818
Tissue enhanced
Detected in all
skeletal muscle:
46.1
UQCC3
ENSSSCG00000038370
ENSG00000204922
Ubiquinol-cytochrome c reductase complex assembly factor 3
Low tissue specificity
Detected in all
UQCRC2
ENSSSCG00000007845
ENSG00000140740
Ubiquinol-cytochrome c reductase core protein 2
Tissue enhanced
Detected in all
skeletal muscle:
72.0
UQCRQ
ENSSSCG00000014289
ENSG00000164405
Ubiquinol-cytochrome c reductase complex III subunit VII
Tissue enhanced
Detected in all
choroid plexus:
69.6
heart:
66.3
skeletal muscle:
67.5
UROC1
ENSSSCG00000001823
ENSG00000159650
Urocanate hydratase
Tissue enriched
Detected in all
liver:
93.2
UROD
ENSSSCG00000003922
ENSG00000126088
Uroporphyrinogen decarboxylase
Low tissue specificity
Detected in all
UROS
ENSSSCG00000010742
ENSG00000188690
Uroporphyrinogen-III synthase isoform 2
Low tissue specificity
Detected in all
USF1
ENSSSCG00000006371
ENSG00000158773
Upstream stimulatory factor 1
Low tissue specificity
Detected in all
« prev
| Page
of 14 |
next »
MENU
