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Gene name
Human disease related genes
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Within tissue variation
UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
Class
Cancers
Cardiovascular diseases
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Endocrine and metabolic diseases
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Other congenital disorders
Other diseases
Reproductive system diseases
Respiratory diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
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14
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16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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15378 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
2.
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
TMEM186
ENSSSCG00000033311
ENSG00000184857
Transmembrane protein 186
Low tissue specificity
Detected in all
TMEM189
ENSSSCG00000027287
ENSG00000240849
Transmembrane protein 189
Tissue enhanced
Detected in all
ovary:
80.9
TMEM19
ENSSSCG00000000510
ENSG00000139291
Transmembrane protein 19
Low tissue specificity
Detected in all
TMEM192
ENSSSCG00000020868
ENSG00000170088
Transmembrane protein 192
Low tissue specificity
Detected in all
TMEM199
ENSSSCG00000040883
ENSG00000244045
Transmembrane protein 199
Low tissue specificity
Detected in all
TMEM2
ENSSSCG00000024257
ENSG00000135048
Transmembrane protein 2
Low tissue specificity
Detected in all
TMEM200A
ENSSSCG00000004201
ENSG00000164484
Transmembrane protein 200A
Tissue enhanced
Detected in many
brain:
16.9
cervix:
24.6
ovary:
14.0
TMEM200C
ENSSSCG00000039627
ENSG00000206432
Transmembrane protein 200C
Tissue enhanced
Detected in many
ductus deferens:
17.8
lens:
27.1
pineal gland:
22.1
TMEM201
ENSSSCG00000003393
ENSG00000188807
Transmembrane protein 201
Low tissue specificity
Detected in all
TMEM203
ENSSSCG00000034562
ENSG00000187713
Transmembrane protein 203
Low tissue specificity
Detected in all
TMEM204
ENSSSCG00000008021
ENSG00000131634
Transmembrane protein 204
Low tissue specificity
Detected in many
TMEM205
ENSSSCG00000013622
ENSG00000105518
Transmembrane protein 205
Tissue enhanced
Detected in all
adrenal gland:
74.8
TMEM206
ENSSSCG00000015598
ENSG00000065600
Transmembrane protein 206
Low tissue specificity
Detected in all
TMEM209
ENSSSCG00000016563
ENSG00000146842
Transmembrane protein 209
Low tissue specificity
Detected in all
TMEM212
ENSSSCG00000011751
ENSG00000186329
Transmembrane protein 212
Tissue enhanced
Detected in all
fallopian tube:
30.6
upper respiratory system:
28.8
TMEM214
ENSSSCG00000008559
ENSG00000119777
Transmembrane protein 214
Low tissue specificity
Detected in all
TMEM216
ENSSSCG00000013084
ENSG00000187049
Transmembrane protein 216
Low tissue specificity
Detected in all
TMEM218
ENSSSCG00000029492
ENSG00000150433
Transmembrane protein 218
Low tissue specificity
Detected in all
TMEM219
ENSSSCG00000021010
ENSG00000149932
Transmembrane protein 219
Tissue enhanced
Detected in many
male glands:
48.2
TMEM220
ENSSSCG00000036454
ENSG00000187824
Transmembrane protein 220
Low tissue specificity
Detected in all
TMEM222
ENSSSCG00000023636
ENSG00000186501
Transmembrane protein 222
Low tissue specificity
Detected in all
TMEM223
ENSSSCG00000038711
ENSG00000168569
Transmembrane protein 223
Low tissue specificity
Detected in all
TMEM225B
ENSSSCG00000034499
ENSG00000244219
Transmembrane protein 225B
Tissue enhanced
Detected in all
testis:
20.6
TMEM229B
ENSSSCG00000023791
ENSG00000198133
Transmembrane protein 229B
Tissue enhanced
Detected in many
liver:
55.5
TMEM232
ENSSSCG00000014196
ENSG00000186952
Transmembrane protein 232
Tissue enriched
Detected in all
lymphoid tissue:
45.7
TMEM234
ENSSSCG00000037312
ENSG00000160055
Transmembrane protein 234
Low tissue specificity
Detected in all
TMEM237
ENSSSCG00000035161
ENSG00000155755
Transmembrane protein 237
Tissue enriched
Detected in many
retina:
47.9
TMEM238
ENSSSCG00000035417
ENSG00000233493
Transmembrane protein 238
Tissue enhanced
Detected in many
male glands:
65.3
TMEM241
ENSSSCG00000040452
ENSG00000134490
Transmembrane protein 241
Low tissue specificity
Detected in all
TMEM242
ENSSSCG00000004063
ENSG00000215712
Transmembrane protein 242
Low tissue specificity
Detected in all
TMEM243
ENSSSCG00000025326
ENSG00000135185
Transmembrane protein 243
Low tissue specificity
Detected in all
TMEM245
ENSSSCG00000005444
ENSG00000106771
Transmembrane protein 245
Low tissue specificity
Detected in all
TMEM246
ENSSSCG00000029687
ENSG00000165152
Transmembrane protein 246
Low tissue specificity
Detected in many
TMEM248
ENSSSCG00000007736
ENSG00000106609
Transmembrane protein 248
Low tissue specificity
Detected in all
TMEM25
ENSSSCG00000029395
ENSG00000149582
Transmembrane protein 25
Tissue enhanced
Detected in many
breast:
24.1
liver:
41.8
TMEM250
ENSSSCG00000034024
ENSG00000238227
Transmembrane protein 250
Low tissue specificity
Detected in all
TMEM251
ENSSSCG00000002458
ENSG00000153485
Transmembrane protein 251
Tissue enhanced
Detected in all
male glands:
39.2
TMEM252
ENSSSCG00000037125
ENSG00000181778
Transmembrane protein 252
Tissue enhanced
Detected in all
kidney:
27.6
TMEM253
ENSSSCG00000030437
ENSG00000232070
Transmembrane protein 253
Tissue enhanced
Detected in all
small intestine:
27.4
TMEM254
ENSSSCG00000024300
ENSG00000133678
Transmembrane protein 254
Tissue enhanced
Detected in all
salivary gland:
118.7
TMEM258
ENSSSCG00000027538
ENSG00000134825
Transmembrane protein 258
Low tissue specificity
Detected in all
TMEM259
ENSSSCG00000027779
ENSG00000182087
Transmembrane protein 259
Low tissue specificity
Detected in all
TMEM26
ENSSSCG00000023525
ENSG00000196932
Transmembrane protein 26
Tissue enhanced
Detected in some
brain:
24.4
ovary:
48.7
TMEM260
ENSSSCG00000005062
ENSG00000070269
Transmembrane protein 260
Low tissue specificity
Detected in all
TMEM263
ENSSSCG00000038968
ENSG00000151135
Transmembrane protein 263
Tissue enhanced
Detected in all
male glands:
54.9
TMEM265
ENSSSCG00000035518
ENSG00000281991
Transmembrane protein 265
Low tissue specificity
Detected in all
TMEM267
ENSSSCG00000032979
ENSG00000151881
Transmembrane protein 267
Tissue enhanced
Detected in all
male glands:
20.3
TMEM268
ENSSSCG00000032835
ENSG00000157693
Transmembrane protein 268
Low tissue specificity
Detected in all
TMEM269
ENSSSCG00000039678
ENSG00000274386
Transmembrane protein 269
Tissue enriched
Detected in many
testis:
52.5
TMEM30A
ENSSSCG00000033155
ENSG00000112697
Transmembrane protein 30A
Low tissue specificity
Detected in all
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