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Chromosome
1
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
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Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
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Cornea
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Lung
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Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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16867 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
OR12D3
ENSSSCG00000030598
ENSG00000112462
Olfactory receptor family 12 subfamily D member 3
Group enriched
Detected in some
lymphoid tissue:
9.0
testis:
6.5
OR13H1
ENSSSCG00000012671
ENSG00000171054
Olfactory receptor family 13 subfamily H member 1
Tissue enhanced
Detected in some
heart:
5.5
lymphoid tissue:
9.8
OR14A16
ENSSSCG00000036754
ENSG00000196772
Olfactory receptor family 14 subfamily A member 16
Tissue enriched
Detected in single
testis:
8.0
OR1B1
ENSSSCG00000037836
ENSG00000280094
Olfactory receptor family 1 subfamily B member 1 (gene/pseudogene)
Tissue enhanced
Detected in some
breast:
5.6
kidney:
6.1
testis:
3.3
OR1F1
ENSSSCG00000007961
ENSG00000168124
Olfactory receptor family 1 subfamily F member 1
Group enriched
Detected in some
epididymis:
5.8
testis:
4.4
OR2B2
ENSSSCG00000039401
ENSG00000168131
Olfactory receptor family 2 subfamily B member 2
Tissue enhanced
Detected in some
epididymis:
9.8
fallopian tube:
3.2
OR2B6
ENSSSCG00000035803
ENSG00000124657
Olfactory receptor family 2 subfamily B member 6
Tissue enhanced
Detected in some
epididymis:
9.8
fallopian tube:
3.9
OR2C1
ENSSSCG00000007959
ENSG00000168158
Olfactory receptor family 2 subfamily C member 1
Tissue enhanced
Detected in many
fallopian tube:
6.8
OR2D2
ENSSSCG00000031270
ENSG00000166368
Olfactory receptor family 2 subfamily D member 2
Tissue enhanced
Detected in many
epididymis:
12.4
male glands:
6.8
OR2S2
ENSSSCG00000039114
ENSG00000278889
Olfactory receptor family 2 subfamily S member 2 (gene/pseudogene)
Tissue enhanced
Detected in some
heart:
3.4
testis:
5.0
OR2Z1
ENSSSCG00000013606
ENSG00000181733
Olfactory receptor family 2 subfamily Z member 1
Tissue enriched
Detected in single
testis:
5.3
OR3A1
ENSSSCG00000031932
ENSG00000180090
Olfactory receptor family 3 subfamily A member 1
Tissue enhanced
Detected in many
male glands:
7.3
skin:
7.1
small intestine:
13.9
OR4K5
ENSSSCG00000002594
ENSG00000176281
Olfactory receptor family 4 subfamily K member 5
Tissue enriched
Detected in some
testis:
5.2
OR4S2
ENSSSCG00000035930
ENSG00000174982
Olfactory receptor family 4 subfamily S member 2
Tissue enhanced
Detected in some
brain:
2.9
cervix:
1.9
testis:
2.5
thyroid gland:
6.7
OR51A7
ENSSSCG00000014752
ENSG00000176895
Olfactory receptor family 51 subfamily A member 7
Tissue enhanced
Detected in some
brain:
1.9
testis:
2.5
thyroid gland:
3.2
OR51B4
ENSSSCG00000014728
ENSG00000183251
Olfactory receptor family 51 subfamily B member 4
Tissue enhanced
Detected in some
lymphoid tissue:
2.0
testis:
2.8
OR51E2
ENSSSCG00000014764
ENSG00000167332
Olfactory receptor family 51 subfamily E member 2
Tissue enhanced
Detected in some
large intestine:
6.5
penis:
3.7
OR51F1
ENSSSCG00000014760
ENSG00000280021
Olfactory receptor family 51 subfamily F member 1 (gene/pseudogene)
Tissue enhanced
Detected in some
brain:
1.9
testis:
3.0
thyroid gland:
2.2
OR51F2
ENSSSCG00000014758
ENSG00000176925
Olfactory receptor family 51 subfamily F member 2
Tissue enhanced
Detected in some
testis:
1.7
thyroid gland:
4.0
OR51L1
ENSSSCG00000014748
ENSG00000176798
Olfactory receptor family 51 subfamily L member 1
Tissue enhanced
Detected in some
brain:
2.2
testis:
2.1
thyroid gland:
3.8
OR51M1
ENSSSCG00000022853
ENSG00000184698
Olfactory receptor family 51 subfamily M member 1
Tissue enhanced
Detected in some
brain:
2.2
lymphoid tissue:
2.8
testis:
3.0
OR51Q1
ENSSSCG00000038108
ENSG00000167360
Olfactory receptor family 51 subfamily Q member 1 (gene/pseudogene)
Tissue enhanced
Detected in some
brain:
8.7
breast:
4.2
kidney:
6.6
OR51S1
ENSSSCG00000014757
ENSG00000176922
Olfactory receptor family 51 subfamily S member 1
Tissue enhanced
Detected in some
brain:
2.6
testis:
3.3
thyroid gland:
1.9
OR51T1
ENSSSCG00000014754
ENSG00000176900
Olfactory receptor family 51 subfamily T member 1
Tissue enhanced
Detected in some
brain:
1.8
testis:
3.0
thyroid gland:
2.8
OR51V1
ENSSSCG00000040712
ENSG00000176742
Olfactory receptor family 51 subfamily V member 1
Group enriched
Detected in some
brain:
1.5
lymphoid tissue:
2.2
testis:
4.3
OR52B2
ENSSSCG00000014635
ENSG00000255307
Olfactory receptor family 52 subfamily B member 2
Tissue enhanced
Detected in many
breast:
8.1
cartilage:
9.8
fallopian tube:
11.8
OR52R1
ENSSSCG00000014759
ENSG00000279270
Olfactory receptor family 52 subfamily R member 1 (gene/pseudogene)
Tissue enhanced
Detected in some
brain:
2.3
testis:
2.7
thyroid gland:
2.6
OR52W1
ENSSSCG00000035041
ENSG00000175485
Olfactory receptor family 52 subfamily W member 1
Tissue enhanced
Detected in many
cartilage:
11.0
mesothelial tissue:
12.4
OR5AP2
ENSSSCG00000036176
ENSG00000172464
Olfactory receptor family 5 subfamily AP member 2
Tissue enriched
Detected in single
testis:
4.0
OR5AU1
ENSSSCG00000032876
ENSG00000169327
Olfactory receptor family 5 subfamily AU member 1
Tissue enhanced
Detected in many
liver:
10.2
OR5B21
ENSSSCG00000013157
ENSG00000198283
Olfactory receptor family 5 subfamily B member 21
Tissue enhanced
Detected in single
testis:
1.6
OR6A2
ENSSSCG00000014617
ENSG00000184933
Olfactory receptor family 6 subfamily A member 2
Low tissue specificity
Detected in many
OR6C2
ENSSSCG00000035793
ENSG00000179695
Olfactory receptor family 6 subfamily C member 2
Tissue enhanced
Detected in some
cornea:
3.5
heart:
5.3
liver:
4.1
OR6N2
ENSSSCG00000006423
ENSG00000188340
Olfactory receptor family 6 subfamily N member 2
Tissue enhanced
Detected in many
adipose tissue:
11.9
lymphoid tissue:
8.7
OR6T1
ENSSSCG00000015153
ENSG00000181499
Olfactory receptor family 6 subfamily T member 1
Tissue enhanced
Detected in some
brain:
1.2
cartilage:
1.2
mesothelial tissue:
1.1
testis:
1.1
OR6V1
ENSSSCG00000024155
ENSG00000225781
Olfactory receptor family 6 subfamily V member 1
Tissue enhanced
Detected in many
liver:
21.9
OR6X1
ENSSSCG00000015146
ENSG00000221931
Olfactory receptor family 6 subfamily X member 1
Tissue enhanced
Detected in some
heart:
3.9
mesothelial tissue:
3.8
OR8B12
ENSSSCG00000040102
ENSG00000170953
Olfactory receptor family 8 subfamily B member 12
Tissue enriched
Detected in single
testis:
9.9
OR8B4
ENSSSCG00000025064
ENSG00000280090
Olfactory receptor family 8 subfamily B member 4 (gene/pseudogene)
Tissue enriched
Detected in single
testis:
11.8
OR8B8
ENSSSCG00000031457
ENSG00000197125
Olfactory receptor family 8 subfamily B member 8
Tissue enriched
Detected in some
testis:
11.4
OR8D1
ENSSSCG00000037492
ENSG00000196341
Olfactory receptor family 8 subfamily D member 1
Tissue enhanced
Detected in some
cartilage:
1.5
testis:
5.2
OR8D2
ENSSSCG00000038356
ENSG00000279116
Olfactory receptor family 8 subfamily D member 2 (gene/pseudogene)
Tissue enhanced
Detected in some
epididymis:
1.0
pineal gland:
1.5
testis:
5.0
OR8D4
ENSSSCG00000015150
ENSG00000181518
Olfactory receptor family 8 subfamily D member 4
Tissue enhanced
Detected in some
heart:
1.0
testis:
4.0
OR8K1
ENSSSCG00000005808
ENSG00000150261
Olfactory receptor family 8 subfamily K member 1
Tissue enhanced
Detected in some
aorta:
1.4
bone marrow:
1.9
testis:
2.3
OR9A4
ENSSSCG00000036925
ENSG00000258083
Olfactory receptor family 9 subfamily A member 4
Tissue enhanced
Detected in many
testis:
4.8
ORAI1
ENSSSCG00000034510
ENSG00000276045
Calcium release-activated calcium channel protein 1
Low tissue specificity
Detected in all
ORAI2
ENSSSCG00000023912
ENSG00000160991
ORAI calcium release-activated calcium modulator 2
Low tissue specificity
Detected in all
ORAI3
ENSSSCG00000007770
ENSG00000175938
ORAI calcium release-activated calcium modulator 3
Low tissue specificity
Detected in all
ORAOV1
ENSSSCG00000012874
ENSG00000149716
Oral cancer overexpressed 1
Low tissue specificity
Detected in all
ORC1
ENSSSCG00000003861
ENSG00000085840
Origin recognition complex subunit 1
Tissue enhanced
Detected in many
lymphoid tissue:
18.0
testis:
41.2
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