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Human disease related genes
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UMAP gene cluster
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Chromosome
1
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MT
Unmapped
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Lymphoid tissue
Male glands
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
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TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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15378 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
ZNF579
ENSSSCG00000025138
ENSG00000218891
Zinc finger protein 579
Low tissue specificity
Detected in all
ZNF580
ENSSSCG00000031349
ENSG00000213015
Zinc finger protein 580
Low tissue specificity
Detected in all
ZNF581
ENSSSCG00000040721
ENSG00000171425
Zinc finger protein 581
Low tissue specificity
Detected in all
ZNF582
ENSSSCG00000003322
ENSG00000018869
Zinc finger protein 582
Low tissue specificity
Detected in all
ZNF584
ENSSSCG00000004004
ENSG00000171574
Zinc finger protein 584
Low tissue specificity
Detected in all
ZNF596
ENSSSCG00000025290
ENSG00000172748
Zinc finger protein 596
Low tissue specificity
Detected in all
ZNF598
ENSSSCG00000023400
ENSG00000167962
Zinc finger protein 598
Low tissue specificity
Detected in all
ZNF599
ENSSSCG00000035876
ENSG00000153896
Zinc finger protein 599
Low tissue specificity
Detected in many
ZNF606
ENSSSCG00000003995
ENSG00000166704
Zinc finger protein 606
Low tissue specificity
Detected in all
ZNF608
ENSSSCG00000014242
ENSG00000168916
Zinc finger protein 608
Low tissue specificity
Detected in all
ZNF609
ENSSSCG00000004551
ENSG00000180357
Zinc finger protein 609
Low tissue specificity
Detected in all
ZNF613
ENSSSCG00000032585
ENSG00000176024
Zinc finger protein 613
Tissue enhanced
Detected in all
epididymis:
52.2
ZNF614
ENSSSCG00000003241
ENSG00000142556
Zinc finger protein 614
Low tissue specificity
Detected in all
ZNF618
ENSSSCG00000005484
ENSG00000157657
Zinc finger protein 618
Tissue enhanced
Detected in all
male glands:
66.9
ZNF619
ENSSSCG00000011271
ENSG00000177873
Zinc finger protein 619
Low tissue specificity
Detected in all
ZNF621
ENSSSCG00000026550
ENSG00000172888
Zinc finger protein 621
Low tissue specificity
Detected in all
ZNF622
ENSSSCG00000016793
ENSG00000173545
Zinc finger protein 622
Low tissue specificity
Detected in all
ZNF623
ENSSSCG00000039679
ENSG00000183309
Zinc finger protein 623
Low tissue specificity
Detected in all
ZNF628
ENSSSCG00000025343
ENSG00000197483
Zinc finger protein 628
Low tissue specificity
Detected in all
ZNF629
ENSSSCG00000007780
ENSG00000102870
Zinc finger protein 629
Low tissue specificity
Detected in all
ZNF630
ENSSSCG00000012286
ENSG00000221994
Zinc finger protein 630
Low tissue specificity
Detected in all
ZNF638
ENSSSCG00000022708
ENSG00000075292
Zinc finger protein 638
Low tissue specificity
Detected in all
ZNF639
ENSSSCG00000038443
ENSG00000121864
Zinc finger protein 639
Low tissue specificity
Detected in all
ZNF641
ENSSSCG00000021654
ENSG00000167528
Zinc finger protein 641
Low tissue specificity
Detected in all
ZNF644
ENSSSCG00000022534
ENSG00000122482
Zinc finger protein 644
Low tissue specificity
Detected in all
ZNF646
ENSSSCG00000026817
ENSG00000167395
Zinc finger protein 646
Tissue enriched
Detected in all
testis:
84.5
ZNF648
ENSSSCG00000015544
ENSG00000179930
Zinc finger protein 648
Tissue enhanced
Detected in many
lung:
9.0
lymphoid tissue:
17.3
ZNF649
ENSSSCG00000038927
ENSG00000198093
Zinc finger protein 649
Low tissue specificity
Detected in all
ZNF652
ENSSSCG00000017546
ENSG00000198740
Zinc finger protein 652
Low tissue specificity
Detected in all
ZNF653
ENSSSCG00000013616
ENSG00000161914
Zinc finger protein 653
Low tissue specificity
Detected in all
ZNF654
ENSSSCG00000036885
ENSG00000175105
Zinc finger protein 654
Low tissue specificity
Detected in all
ZNF655
ENSSSCG00000007617
ENSG00000197343
Zinc finger protein 655
Low tissue specificity
Detected in all
ZNF660
ENSSSCG00000011310
ENSG00000144792
Zinc finger protein 660
Low tissue specificity
Detected in many
ZNF662
ENSSSCG00000011292
ENSG00000182983
Zinc finger protein 662
Low tissue specificity
Detected in all
ZNF664
ENSSSCG00000032962
ENSG00000179195
Zinc finger protein 664
Low tissue specificity
Detected in all
ZNF667
ENSSSCG00000024622
ENSG00000198046
Zinc finger protein 667
Low tissue specificity
Detected in all
ZNF668
ENSSSCG00000007767
ENSG00000167394
Zinc finger protein 668
Low tissue specificity
Detected in all
ZNF671
ENSSSCG00000003990
ENSG00000083814
Zinc finger protein 671
Low tissue specificity
Detected in all
ZNF672
ENSSSCG00000013978
ENSG00000171161
Zinc finger protein 672
Tissue enhanced
Detected in all
testis:
48.2
ZNF674
ENSSSCG00000012264
ENSG00000251192
Zinc finger protein 674
Low tissue specificity
Detected in all
ZNF684
ENSSSCG00000003979
ENSG00000117010
Zinc finger protein 684
Low tissue specificity
Detected in all
ZNF687
ENSSSCG00000006627
ENSG00000143373
Zinc finger protein 687
Low tissue specificity
Detected in all
ZNF688
ENSSSCG00000037875
ENSG00000229809
Zinc finger protein 688
Low tissue specificity
Detected in all
ZNF689
ENSSSCG00000033496
ENSG00000156853
Zinc finger protein 689
Low tissue specificity
Detected in all
ZNF691
ENSSSCG00000040559
ENSG00000164011
Zinc finger protein 691
Low tissue specificity
Detected in all
ZNF692
ENSSSCG00000030672
ENSG00000171163
Zinc finger protein 692
Low tissue specificity
Detected in all
ZNF696
ENSSSCG00000006959
ENSG00000185730
Zinc finger protein 696
Low tissue specificity
Detected in all
ZNF697
ENSSSCG00000006718
ENSG00000143067
Zinc finger protein 697
Tissue enhanced
Detected in many
salivary gland:
31.3
ZNF7
ENSSSCG00000005890
ENSG00000147789
Zinc finger protein 7
Low tissue specificity
Detected in all
ZNF70
ENSSSCG00000010076
ENSG00000187792
Zinc finger protein 70
Low tissue specificity
Detected in all
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