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Keyword
Chromosome
1
2
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7
8
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
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Lymphoid tissue
Male glands
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Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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15957 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
OGN
ENSSSCG00000034607
ENSG00000106809
Mimecan precursor
Tissue enhanced
Detected in all
choroid plexus:
87.6
OGT
ENSSSCG00000012403
ENSG00000147162
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit
Low tissue specificity
Detected in all
OIP5
ENSSSCG00000004750
ENSG00000104147
Opa interacting protein 5
Low tissue specificity
Detected in all
OIT3
ENSSSCG00000010293
ENSG00000138315
Oncoprotein-induced transcript 3 protein precursor
Tissue enriched
Detected in some
liver:
35.5
OLA1
ENSSSCG00000015963
ENSG00000138430
Obg like ATPase 1
Tissue enhanced
Detected in all
lens:
75.6
OLFM1
ENSSSCG00000029715
ENSG00000130558
Olfactomedin 1
Tissue enhanced
Detected in many
brain:
87.2
lens:
29.0
OLFM2
ENSSSCG00000027434
ENSG00000105088
Olfactomedin 2
Tissue enriched
Detected in all
ovary:
121.9
OLFM3
ENSSSCG00000006858
ENSG00000118733
Olfactomedin 3
Group enriched
Detected in some
brain:
33.3
ovary:
12.9
OLFML2A
ENSSSCG00000005593
ENSG00000185585
Olfactomedin-like protein 2A precursor
Tissue enhanced
Detected in all
salivary gland:
62.3
OLFML2B
ENSSSCG00000006345
ENSG00000162745
Olfactomedin like 2B
Tissue enhanced
Detected in many
smooth muscle:
70.2
OLR1
ENSSSCG00000000647
ENSG00000173391
Oxidized low-density lipoprotein receptor 1
Tissue enhanced
Detected in all
mesothelial tissue:
44.0
OMA1
ENSSSCG00000003831
ENSG00000162600
OMA1 zinc metallopeptidase
Low tissue specificity
Detected in all
OMD
ENSSSCG00000008073
ENSG00000127083
Osteomodulin
Tissue enhanced
Detected in all
dura mater:
72.3
ONECUT1
ENSSSCG00000004616
ENSG00000169856
One cut homeobox 1
Group enriched
Detected in many
gallbladder:
33.4
liver:
65.8
OPA1
ENSSSCG00000011822
ENSG00000198836
OPA1, mitochondrial dynamin like GTPase
Low tissue specificity
Detected in all
OPA3
ENSSSCG00000037100
ENSG00000125741
OPA3, outer mitochondrial membrane lipid metabolism regulator
Low tissue specificity
Detected in all
OPCML
ENSSSCG00000037534
ENSG00000183715
Opioid binding protein/cell adhesion molecule like
Tissue enriched
Detected in some
brain:
42.1
OPHN1
ENSSSCG00000022676
ENSG00000079482
Oligophrenin 1
Low tissue specificity
Detected in all
OPLAH
ENSSSCG00000005911
ENSG00000178814
5-oxoprolinase, ATP-hydrolysing
Tissue enhanced
Detected in many
male glands:
45.1
salivary gland:
29.5
OPRD1
ENSSSCG00000027401
ENSG00000116329
Opioid receptor delta 1
Tissue enriched
Detected in some
thyroid gland:
34.7
OPRL1
ENSSSCG00000031228
ENSG00000125510
Nociceptin receptor
Tissue enhanced
Detected in many
adipose tissue:
20.5
aorta:
10.8
bone marrow:
10.0
brain:
15.0
OPTN
ENSSSCG00000023247
ENSG00000123240
Optineurin
Low tissue specificity
Detected in all
OR13H1
ENSSSCG00000012671
ENSG00000171054
Olfactory receptor family 13 subfamily H member 1
Tissue enhanced
Detected in some
heart:
5.5
lymphoid tissue:
9.8
OR1K1
ENSSSCG00000039297
ENSG00000165204
Olfactory receptor family 1 subfamily K member 1
Low tissue specificity
Detected in many
OR2C1
ENSSSCG00000007959
ENSG00000168158
Olfactory receptor family 2 subfamily C member 1
Tissue enhanced
Detected in many
fallopian tube:
6.8
OR2D2
ENSSSCG00000031270
ENSG00000166368
Olfactory receptor family 2 subfamily D member 2
Tissue enhanced
Detected in many
epididymis:
12.4
male glands:
6.8
OR2K2
ENSSSCG00000005458
ENSG00000171133
Olfactory receptor family 2 subfamily K member 2
Tissue enhanced
Detected in some
aorta:
2.5
OR2S2
ENSSSCG00000039114
ENSG00000278889
Olfactory receptor family 2 subfamily S member 2 (gene/pseudogene)
Tissue enhanced
Detected in some
heart:
3.4
testis:
5.0
OR51F1
ENSSSCG00000014760
ENSG00000280021
Olfactory receptor family 51 subfamily F member 1 (gene/pseudogene)
Tissue enhanced
Detected in some
brain:
1.9
testis:
3.0
thyroid gland:
2.2
OR52B2
ENSSSCG00000014635
ENSG00000255307
Olfactory receptor family 52 subfamily B member 2
Tissue enhanced
Detected in many
breast:
8.1
cartilage:
9.8
fallopian tube:
11.8
OR52W1
ENSSSCG00000035041
ENSG00000175485
Olfactory receptor family 52 subfamily W member 1
Tissue enhanced
Detected in many
cartilage:
11.0
mesothelial tissue:
12.4
OR6A2
ENSSSCG00000014617
ENSG00000184933
Olfactory receptor family 6 subfamily A member 2
Low tissue specificity
Detected in many
OR6J1
ENSSSCG00000002052
ENSG00000255804
Olfactory receptor family 6 subfamily J member 1 (gene/pseudogene)
Tissue enhanced
Detected in many
skeletal muscle:
10.6
OR6K3
ENSSSCG00000040627
ENSG00000203757
Olfactory receptor family 6 subfamily K member 3
Tissue enhanced
Detected in some
adipose tissue:
2.3
heart:
1.9
lymphoid tissue:
1.8
mesothelial tissue:
1.7
OR6K6
ENSSSCG00000006425
ENSG00000180433
Olfactory receptor family 6 subfamily K member 6
Tissue enriched
Detected in some
lymphoid tissue:
14.1
OR6N1
ENSSSCG00000006424
ENSG00000197403
Olfactory receptor family 6 subfamily N member 1
Tissue enhanced
Detected in some
adipose tissue:
6.6
lymphoid tissue:
8.1
mesothelial tissue:
4.6
OR6N2
ENSSSCG00000006423
ENSG00000188340
Olfactory receptor family 6 subfamily N member 2
Tissue enhanced
Detected in many
adipose tissue:
11.9
lymphoid tissue:
8.7
OR6V1
ENSSSCG00000024155
ENSG00000225781
Olfactory receptor family 6 subfamily V member 1
Tissue enhanced
Detected in many
liver:
21.9
OR6X1
ENSSSCG00000015146
ENSG00000221931
Olfactory receptor family 6 subfamily X member 1
Tissue enhanced
Detected in some
heart:
3.9
mesothelial tissue:
3.8
OR9A4
ENSSSCG00000036925
ENSG00000258083
Olfactory receptor family 9 subfamily A member 4
Tissue enhanced
Detected in many
testis:
4.8
ORAI1
ENSSSCG00000034510
ENSG00000276045
Calcium release-activated calcium channel protein 1
Low tissue specificity
Detected in all
ORAI2
ENSSSCG00000023912
ENSG00000160991
ORAI calcium release-activated calcium modulator 2
Low tissue specificity
Detected in all
ORAI3
ENSSSCG00000007770
ENSG00000175938
ORAI calcium release-activated calcium modulator 3
Low tissue specificity
Detected in all
ORAOV1
ENSSSCG00000012874
ENSG00000149716
Oral cancer overexpressed 1
Low tissue specificity
Detected in all
ORC2
ENSSSCG00000016098
ENSG00000115942
Origin recognition complex subunit 2
Low tissue specificity
Detected in all
ORC3
ENSSSCG00000004306
ENSG00000135336
Origin recognition complex subunit 3
Low tissue specificity
Detected in all
ORC4
ENSSSCG00000015668
ENSG00000115947
Origin recognition complex subunit 4
Low tissue specificity
Detected in all
ORC5
ENSSSCG00000015427
ENSG00000164815
Origin recognition complex subunit 5
Low tissue specificity
Detected in all
ORC6
ENSSSCG00000024443
ENSG00000091651
Origin recognition complex subunit 6
Low tissue specificity
Detected in all
ORMDL3
ENSSSCG00000017492
ENSG00000172057
ORMDL sphingolipid biosynthesis regulator 3
Tissue enhanced
Detected in all
adipose tissue:
90.6
liver:
67.4
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